RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 FAM110BQ8TC76 370 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 OTUD5Q96G74 571 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 CDHR5Q9HBB8 845 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 TNFRSF12AQ9NP84 129 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 STAP1Q9ULZ2 295 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 PAPPA2Q9BXP8 1791 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 CSRP3P50461 194 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 RFTN1Q14699 578 aaPredicted RBP27.83■■■□□ 2.05
CBX4-201ENST00000269397 LPGAT1Q92604 370 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 NT5C3BQ969T7 300 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 LRRC4Q9HBW1 653 aa27.83■■■□□ 2.05
CBX4-201ENST00000269397 MAGEB3O15480 346 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 TMED1Q13445 227 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 NOL11Q9H8H0 719 aaKnown RBP27.82■■■□□ 2.04
CBX4-201ENST00000269397 PLXNA1Q9UIW2 1896 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 PRORSD1PA6NEY8 169 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 SLCO1B7G3V0H7 640 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 BAG6P46379 1132 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 NPY2RP49146 381 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 RNF135Q8IUD6 432 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 SIX6OS1Q8N1H7 587 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 APPL2Q8NEU8 664 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 SLCO4A1Q96BD0 722 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 OSBPL2Q9H1P3 480 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 POMKQ9H5K3 350 aa27.82■■■□□ 2.04
CBX4-201ENST00000269397 CKMT2P17540 419 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 ADSLP30566 484 aaPredicted RBP27.81■■■□□ 2.04
CBX4-201ENST00000269397 ADARP55265 1226 aaKnown RBP27.81■■■□□ 2.04
CBX4-201ENST00000269397 PITRM1Q5JRX3 1037 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 CATSPER4Q7RTX7 472 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 OSTM1Q86WC4 334 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 HERC6Q8IVU3 1022 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 PNPLA1Q8N8W4 532 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 B3GALNT2Q8NCR0 500 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 GPR78Q96P69 363 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 SLC39A3Q9BRY0 314 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 CROCCQ5TZA2 2017 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 MAGEB16A2A368 324 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 BTBD19C9JJ37 291 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 FYNP06241 537 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 EMP3P54852 163 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 MAP3K7CLP57077 242 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 AGKQ53H12 422 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 KDELC2Q7Z4H8 507 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 PPWD1Q96BP3 646 aaKnown RBP27.81■■■□□ 2.04
CBX4-201ENST00000269397 PLEKHA5Q9HAU0 1116 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 RBPJLQ9UBG7 517 aa27.81■■■□□ 2.04
CBX4-201ENST00000269397 RSL24D1Q9UHA3 163 aaKnown RBP27.81■■■□□ 2.04
CBX4-201ENST00000269397 POLR2AP24928 1970 aaKnown RBP27.8■■■□□ 2.04
CBX4-201ENST00000269397 DNAJC25-GNG10A0A024R161 153 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 FBP2O00757 339 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 MT-CYBP00156 380 aaPredicted RBP27.8■■■□□ 2.04
CBX4-201ENST00000269397 IGFBP6P24592 240 aaPredicted RBP27.8■■■□□ 2.04
CBX4-201ENST00000269397 TKTL1P51854 596 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 PLK1P53350 603 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 GJA9P57773 515 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 KRT80Q6KB66 452 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 TRIM67Q6ZTA4 783 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 ZNF597Q96LX8 424 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 FAM95CA0A1B0GW59 222 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 NDST2P52849 883 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 CDH17Q12864 832 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 PDZD4Q76G19 769 aaPredicted RBP27.8■■■□□ 2.04
CBX4-201ENST00000269397 DUSP16Q9BY84 665 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 TIMMDC1Q9NPL8 285 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 SLC2A6Q9UGQ3 507 aa27.8■■■□□ 2.04
CBX4-201ENST00000269397 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.8■■■□□ 2.04
CBX4-201ENST00000269397 DNAH12Q6ZR08 3092 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 YJEFN3A6XGL0 299 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 HK2P52789 917 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 RAB10P61026 200 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 FRG1Q14331 258 aaKnown RBP27.79■■■□□ 2.04
CBX4-201ENST00000269397 DCAF4L1Q3SXM0 396 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 MARCH8Q5T0T0 291 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 ESRP1Q6NXG1 681 aaKnown RBP27.79■■■□□ 2.04
CBX4-201ENST00000269397 OR9I1Q8NGQ6 314 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 ELP3Q9H9T3 547 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 CHST12Q9NRB3 414 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 CACNA2D2Q9NY47 1150 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 H6PDO95479 791 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 STMN1P16949 149 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 C1QTNF8P60827 252 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 PRAMEP78395 509 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 SOX4Q06945 474 aaPredicted RBP27.79■■■□□ 2.04
CBX4-201ENST00000269397 DCTN2Q13561 401 aaKnown RBP27.79■■■□□ 2.04
CBX4-201ENST00000269397 LAMC2Q13753 1193 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 SLC27A1Q6PCB7 646 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 BORAQ6PGQ7 559 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 LPCAT2Q7L5N7 544 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 BNIPLQ7Z465 357 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 HEXDCQ8WVB3 486 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 ELMO2Q96JJ3 720 aa27.79■■■□□ 2.04
CBX4-201ENST00000269397 WDR6Q9NNW5 1121 aaKnown RBP27.79■■■□□ 2.04
CBX4-201ENST00000269397 TIPRLO75663 272 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 ZNF23P17027 643 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 KCNA5P22460 613 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 RHDQ02161 417 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 CREB5Q02930 508 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 FASTKQ14296 549 aaKnown RBP27.78■■■□□ 2.04
CBX4-201ENST00000269397 REP15Q6BDI9 236 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms