RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PKN3Q6P5Z2 889 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 POTEHQ6S545 545 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 HTR3DQ70Z44 454 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 RTL10Q7L3V2 364 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 BBS7Q8IWZ6 715 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 DENND1AQ8TEH3 1009 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF473Q8WTR7 871 aaKnown RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 BHMTQ93088 406 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 TADA1Q96BN2 335 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 APOPT1Q96IL0 206 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF317Q96PQ6 595 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 SMG9Q9H0W8 520 aaKnown RBP11.72□□□□□ -0.53
SCAF11-201ENST00000266589 HAUS2Q9NVX0 235 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 SEPT3Q9UH03 358 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 TCAF1Q9Y4C2 921 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 PSAT1Q9Y617 370 aa11.72□□□□□ -0.53
SCAF11-201ENST00000266589 HMX2A2RU54 273 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 LEFTY2O00292 366 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 ASMTLO95671 621 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 PTPN2P17706 415 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 PFKLP17858 780 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 CCT5P48643 541 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 EPHA5P54756 1037 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 IL9RQ01113 521 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 SLC18A2Q05940 514 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 CDH18Q13634 790 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 SEPT6Q14141 434 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 SLC1A5Q15758 541 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 GLIPR1L2Q4G1C9 344 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 HSP90AA5PQ58FG0 334 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 GPR158Q5T848 1215 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 FOXR1Q6PIV2 292 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF783Q6ZMS7 281 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 SH2D5Q6ZV89 423 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 KCNMB4Q86W47 210 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 CKAP2Q8WWK9 683 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 TCEAL4Q96EI5 215 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 MGME1Q9BQP7 344 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 ARNT2Q9HBZ2 717 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 C20orf96Q9NUD7 363 aaPredicted RBP11.71□□□□□ -0.53
SCAF11-201ENST00000266589 TXNDC16Q9P2K2 825 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 DNMT3BQ9UBC3 853 aaKnown RBP11.71□□□□□ -0.53
SCAF11-201ENST00000266589 ZNF510Q9Y2H8 683 aa11.71□□□□□ -0.53
SCAF11-201ENST00000266589 PER2O15055 1255 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 RFPL1O75677 317 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 FGF19O95750 216 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 RHOP08100 348 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 VIMP08670 466 aaKnown RBP11.71□□□□□ -0.54
SCAF11-201ENST00000266589 MZF1P28698 734 aaPredicted RBP11.71□□□□□ -0.54
SCAF11-201ENST00000266589 RFTN1Q14699 578 aaPredicted RBP11.71□□□□□ -0.54
SCAF11-201ENST00000266589 TEAD2Q15562 447 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 ALG1LQ6GMV1 187 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 CPXM2Q8N436 756 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 TDRD5Q8NAT2 981 aaKnown RBP11.71□□□□□ -0.54
SCAF11-201ENST00000266589 WFDC5Q8TCV5 224 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 TCP10LQ8TDR4 215 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 DDI1Q8WTU0 396 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 PTCD2Q8WV60 388 aaKnown RBP11.71□□□□□ -0.54
SCAF11-201ENST00000266589 MAGEB18Q96M61 343 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 PSKH2Q96QS6 385 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 AGAP2Q99490 1192 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 CPNE1Q99829 537 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 ARHGAP26Q9UNA1 814 aa11.71□□□□□ -0.54
SCAF11-201ENST00000266589 TCP11X1B4DZS4 312 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 TM9SF1O15321 606 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 ITGA2BP08514 1039 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 DRD4P21917 467 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 ADRA1DP25100 572 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 HOXA9P31269 272 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 AVPR1AP37288 418 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 GP5P40197 560 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 CSKP41240 450 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 SERPINH1P50454 418 aaKnown RBP11.7□□□□□ -0.54
SCAF11-201ENST00000266589 NEK3P51956 506 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 ARF5P84085 180 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
SCAF11-201ENST00000266589 QPCTQ16769 361 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 SLC5A9Q2M3M2 681 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 SIRPB2Q5JXA9 342 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 TEDDM1Q5T9Z0 273 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 PDPK2PQ6A1A2 396 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 LVRNQ6Q4G3 990 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 CPLX4Q7Z7G2 160 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 MFN1Q8IWA4 741 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 LRRC34Q8IZ02 419 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 EXOC2Q96KP1 924 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 TGS1Q96RS0 853 aaKnown RBP11.7□□□□□ -0.54
SCAF11-201ENST00000266589 C12orf65Q9H3J6 166 aaKnown RBP11.7□□□□□ -0.54
SCAF11-201ENST00000266589 MRM3Q9HC36 420 aaKnown RBP11.7□□□□□ -0.54
SCAF11-201ENST00000266589 IARS2Q9NSE4 1012 aaKnown RBP11.7□□□□□ -0.54
SCAF11-201ENST00000266589 PRKAG3Q9UGI9 489 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 VPS28Q9UK41 221 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 CCL26Q9Y258 94 aa11.7□□□□□ -0.54
SCAF11-201ENST00000266589 LOC285095A0A1B0GVY8 99 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 GOLGA8TH3BQL2 631 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 COPEO14579 308 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 SNAP91O60641 907 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 XYLBO75191 536 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 MOSPD3O75425 235 aa11.69□□□□□ -0.54
SCAF11-201ENST00000266589 SERPINF2P08697 491 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms