RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 WDR6Q9NNW5 1121 aaKnown RBP17.01■□□□□ 0.31
SQLE-201ENST00000265896 RIMS3Q9UJD0 308 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 FAM95CA0A1B0GW59 222 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 TCAF2A6NFQ2 919 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 TMX2-CTNND1H3BSU7 103 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 CES1P23141 567 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 BEX3Q00994 111 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 ADGRE1Q14246 886 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 PTPRCAPQ14761 206 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 ANO4Q32M45 955 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 NOL9Q5SY16 702 aaKnown RBP17.01■□□□□ 0.31
SQLE-201ENST00000265896 NOTUMQ6P988 496 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 C4orf22Q6V702 233 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 ZNF354CQ86Y25 554 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 PCED1BQ96HM7 432 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 NFKBIZQ9BYH8 718 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 DRC3Q9H069 523 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 ZDHHC7Q9NXF8 308 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 IGSF9Q9P2J2 1179 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 EGFL7Q9UHF1 273 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 TIPRLO75663 272 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 SLC25A27O95847 323 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 CHRM3P20309 590 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 SLC1A2P43004 574 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 ITKQ08881 620 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 LRRC23Q53EV4 343 aaPredicted RBP17.01■□□□□ 0.31
SQLE-201ENST00000265896 SREK1Q8WXA9 508 aaKnown RBP17.01■□□□□ 0.31
SQLE-201ENST00000265896 PRICKLE1Q96MT3 831 aaPredicted RBP17.01■□□□□ 0.31
SQLE-201ENST00000265896 C1QTNF1Q9BXJ1 281 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 CPA4Q9UI42 421 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 UBQLN1Q9UMX0 589 aaKnown RBP17.01■□□□□ 0.31
SQLE-201ENST00000265896 ACOT9Q9Y305 439 aa17.01■□□□□ 0.31
SQLE-201ENST00000265896 LRRC14BA6NHZ5 514 aa17■□□□□ 0.31
SQLE-201ENST00000265896 SAC3D1A6NKF1 404 aa17■□□□□ 0.31
SQLE-201ENST00000265896 ZNF839A8K0R7 811 aa17■□□□□ 0.31
SQLE-201ENST00000265896 PDLIM1O00151 329 aa17■□□□□ 0.31
SQLE-201ENST00000265896 PIRO00625 290 aa17■□□□□ 0.31
SQLE-201ENST00000265896 GJB3O75712 270 aa17■□□□□ 0.31
SQLE-201ENST00000265896 CTSHP09668 335 aa17■□□□□ 0.31
SQLE-201ENST00000265896 C16orf89Q6UX73 402 aa17■□□□□ 0.31
SQLE-201ENST00000265896 TRIM67Q6ZTA4 783 aa17■□□□□ 0.31
SQLE-201ENST00000265896 ADGRG6Q86SQ4 1221 aa17■□□□□ 0.31
SQLE-201ENST00000265896 UNC93AQ86WB7 457 aa17■□□□□ 0.31
SQLE-201ENST00000265896 CRYBG2Q8N1P7 616 aa17■□□□□ 0.31
SQLE-201ENST00000265896 SERPINI1Q99574 410 aa17■□□□□ 0.31
SQLE-201ENST00000265896 SMOQ99835 787 aa17■□□□□ 0.31
SQLE-201ENST00000265896 NAT9Q9BTE0 207 aa17■□□□□ 0.31
SQLE-201ENST00000265896 ADAMTS10Q9H324 1103 aa17■□□□□ 0.31
SQLE-201ENST00000265896 CASS4Q9NQ75 786 aa17■□□□□ 0.31
SQLE-201ENST00000265896 DSEQ9UL01 958 aa17■□□□□ 0.31
SQLE-201ENST00000265896 AURKCQ9UQB9 309 aa17■□□□□ 0.31
SQLE-201ENST00000265896 FNDC3AQ9Y2H6 1198 aaKnown RBP17■□□□□ 0.31
SQLE-201ENST00000265896 CROCCQ5TZA2 2017 aa17■□□□□ 0.31
SQLE-201ENST00000265896 DDHD2O94830 711 aa17■□□□□ 0.31
SQLE-201ENST00000265896 GEN1Q17RS7 908 aa17■□□□□ 0.31
SQLE-201ENST00000265896 STXBP5Q5T5C0 1151 aa17■□□□□ 0.31
SQLE-201ENST00000265896 ZYG11AQ6WRX3 759 aa17■□□□□ 0.31
SQLE-201ENST00000265896 IFNEQ86WN2 208 aa17■□□□□ 0.31
SQLE-201ENST00000265896 SIKE1Q9BRV8 207 aa17■□□□□ 0.31
SQLE-201ENST00000265896 COLEC11Q9BWP8 271 aa17■□□□□ 0.31
SQLE-201ENST00000265896 STN1Q9H668 368 aaKnown RBP17■□□□□ 0.31
SQLE-201ENST00000265896 TIMM44O43615 452 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 SNAI1O95863 264 aaPredicted RBP16.99■□□□□ 0.31
SQLE-201ENST00000265896 FAM200BP0CF97 657 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 CDK18Q07002 472 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 MAP3K21Q5TCX8 1036 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 PIM3Q86V86 326 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 HSFY1Q96LI6 401 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 EFCAB1Q9HAE3 211 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 TSR3Q9UJK0 312 aaKnown RBP16.99■□□□□ 0.31
SQLE-201ENST00000265896 PRORSD1PA6NEY8 169 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 F8W810 466 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 MPOP05164 745 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 PIRTP0C851 137 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 GALK1P51570 392 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 PSME3P61289 254 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 CCNA1P78396 465 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 GRM2Q14416 872 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 PRPSAP1Q14558 356 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 CYS1Q717R9 158 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 TFAP2DQ7Z6R9 452 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 KDM1BQ8NB78 822 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 ZMIZ2Q8NF64 920 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 PPTC7Q8NI37 304 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 TNIP3Q96KP6 325 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 GBA3Q9H227 469 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 SOX17Q9H6I2 414 aaPredicted RBP16.99■□□□□ 0.31
SQLE-201ENST00000265896 ZBTB26Q9HCK0 441 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 CRYL1Q9Y2S2 319 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 COMMD3-BMI1R4GMX3 469 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 LTBP3Q9NS15 1303 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 USP34Q70CQ2 3546 aa16.99■□□□□ 0.31
SQLE-201ENST00000265896 KLHL33A6NCF5 533 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 GPR32O75388 356 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 DAB1O75553 588 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 BDNFP23560 247 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 GJA5P36382 358 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 ACADSBP45954 432 aa16.98■□□□□ 0.31
SQLE-201ENST00000265896 IREB2P48200 963 aaKnown RBP16.98■□□□□ 0.31
SQLE-201ENST00000265896 CAPRIN1Q14444 709 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms