RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 KNL1Q8NG31 2342 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 F5P12259 2224 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 E5RI56 91 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 NEMP1O14524 444 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 GIPC1O14908 333 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 SNAP91O60641 907 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 CRTAMO95727 393 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 HSPA4LO95757 839 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 NMBRP28336 390 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 CHI3L2Q15782 390 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 ESRP1Q6NXG1 681 aaKnown RBP9.44□□□□□ -0.9
SSR3-201ENST00000265044 POTEHQ6S545 545 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 SPATS2Q86XZ4 545 aaKnown RBP9.44□□□□□ -0.9
SSR3-201ENST00000265044 TCEAL8Q8IYN2 117 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 CNTD1Q8N815 330 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 SH3RF2Q8TEC5 729 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 OXNAD1Q96HP4 312 aaPredicted RBP9.44□□□□□ -0.9
SSR3-201ENST00000265044 CPNE1Q99829 537 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 PRKD2Q9BZL6 878 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 CRYL1Q9Y2S2 319 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 RWDD3Q9Y3V2 267 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 PKP3Q9Y446 797 aa9.44□□□□□ -0.9
SSR3-201ENST00000265044 TPP1O14773 563 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 PHGDHO43175 533 aaKnown RBP9.43□□□□□ -0.9
SSR3-201ENST00000265044 CRCPO75575 148 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 CA3P07451 260 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 ITGA2BP08514 1039 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 CNTFP26441 200 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 KPNA2P52292 529 aaKnown RBP9.43□□□□□ -0.9
SSR3-201ENST00000265044 LAMB3Q13751 1172 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 NXNQ6DKJ4 435 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 MRNIPQ6NTE8 343 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 PACS1Q6VY07 963 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 GLT6D1Q7Z4J2 308 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 GRASPQ7Z6J2 395 aaPredicted RBP9.43□□□□□ -0.9
SSR3-201ENST00000265044 CMC1Q7Z7K0 106 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 RELL1Q8IUW5 271 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 UMODL1-AS1Q8N2C9 162 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 AZIN2Q96A70 460 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 ERLEC1Q96DZ1 483 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 MAGEB18Q96M61 343 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 AGAP2Q99490 1192 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 PLCD4Q9BRC7 762 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 ACTL7BQ9Y614 415 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 A0A096LPK6 155 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 HIDE1A8MVS5 230 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 E7ESA3 106 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 GLP2RO95838 553 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 GSTA1P08263 222 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 STMN1P16949 149 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 BGNP21810 368 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 ABL2P42684 1182 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 ERVFC1P60507 584 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 SEMA3BQ13214 749 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 GRTP1Q5TC63 336 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 PKN3Q6P5Z2 889 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 BHLHA9Q7RTU4 235 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 OVCA2Q8WZ82 227 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 HDAC10Q969S8 669 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 E2F7Q96AV8 911 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 SLC39A13Q96H72 371 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 APOPT1Q96IL0 206 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 TSGA13Q96PP4 275 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 SLC17A7Q9P2U7 560 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 SLC25A13Q9UJS0 675 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 MID2Q9UJV3 735 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 PHTF1Q9UMS5 762 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 FCF1Q9Y324 198 aaKnown RBP9.43□□□□□ -0.9
SSR3-201ENST00000265044 SIP14410 1827 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 TM9SF1O15321 606 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 GLRA3O75311 464 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 SERPINB8P50452 374 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 BCL2L1Q07817 233 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 STX3Q13277 289 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 MPPE1Q53F39 396 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 N4BP2L1Q5TBK1 243 aaPredicted RBP9.43□□□□□ -0.9
SSR3-201ENST00000265044 WDR75Q8IWA0 830 aaKnown RBP9.43□□□□□ -0.9
SSR3-201ENST00000265044 CAB39LQ9H9S4 337 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 FBXO6Q9NRD1 293 aaPredicted RBP9.43□□□□□ -0.9
SSR3-201ENST00000265044 HCFC1R1Q9NWW0 138 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 FAM8A1Q9UBU6 413 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 LGALS13Q9UHV8 139 aa9.43□□□□□ -0.9
SSR3-201ENST00000265044 G3BP2Q9UN86 482 aaKnown RBP9.43□□□□□ -0.9
SSR3-201ENST00000265044 USP15Q9Y4E8 981 aaPredicted RBP9.43□□□□□ -0.9
SSR3-201ENST00000265044 KCNA4P22459 653 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 CD68P34810 354 aaPredicted RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 PPARGP37231 505 aaPredicted RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 CD151P48509 253 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 SERINC3Q13530 473 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 TEAD2Q15562 447 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 C1orf53Q5VUE5 145 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 TDRPQ86YL5 185 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 ARHGAP12Q8IWW6 846 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 CMTM8Q8IZV2 173 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 SLC22A12Q96S37 553 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 FAM167BQ9BTA0 163 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 PHACTR1Q9C0D0 580 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 BPIFA1Q9NP55 256 aa9.42□□□□□ -0.9
SSR3-201ENST00000265044 RRP15Q9Y3B9 282 aaKnown RBP9.42□□□□□ -0.9
SSR3-201ENST00000265044 CAPN7Q9Y6W3 813 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms