RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NRBP2Q9NSY0 501 aa13.29□□□□□ -0.28
NUP54-201ENST00000264883 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.29□□□□□ -0.28
NUP54-201ENST00000264883 CYTH4Q9UIA0 394 aa13.29□□□□□ -0.28
NUP54-201ENST00000264883 SAC3D1A6NKF1 404 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
NUP54-201ENST00000264883 TIPRLO75663 272 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 KCNH1O95259 989 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 POLR2EP19388 210 aaKnown RBP13.28□□□□□ -0.28
NUP54-201ENST00000264883 MZF1P28698 734 aaPredicted RBP13.28□□□□□ -0.28
NUP54-201ENST00000264883 MERTKQ12866 999 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 CAPSQ13938 189 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 ZNF667Q5HYK9 610 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 PPM1JQ5JR12 505 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 KCNT2Q6UVM3 1135 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 COLGALT2Q8IYK4 626 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 MPP5Q8N3R9 675 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 EMC1Q8N766 993 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 PLD5Q8N7P1 536 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 LILRB4Q8NHJ6 448 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 CAPSLQ8WWF8 208 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 CDKL2Q92772 493 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 PBXIP1Q96AQ6 731 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 TCF12Q99081 682 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 PDZD7Q9H5P4 517 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 MRPL40Q9NQ50 206 aaKnown RBP13.28□□□□□ -0.28
NUP54-201ENST00000264883 LOC285556D6RIA3 1793 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 TANC1Q9C0D5 1861 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 IL18RAPO95256 599 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 HSPA8P11142 646 aaKnown RBP13.28□□□□□ -0.28
NUP54-201ENST00000264883 MLNP12872 115 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 EEF1DP29692 281 aaKnown RBP13.28□□□□□ -0.28
NUP54-201ENST00000264883 ADSLP30566 484 aaPredicted RBP13.28□□□□□ -0.28
NUP54-201ENST00000264883 TNFSF9P41273 254 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 BCAR1P56945 870 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 PSME3P61289 254 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 IFITM2Q01629 132 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 PGS1Q32NB8 556 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 STEAP4Q687X5 459 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 NAPRTQ6XQN6 538 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 ZBTB8OSQ8IWT0 167 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 CNTD1Q8N815 330 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 ABHD11Q8NFV4 315 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 OR13F1Q8NGS4 319 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 LPGAT1Q92604 370 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 SH3YL1Q96HL8 342 aaPredicted RBP13.28□□□□□ -0.28
NUP54-201ENST00000264883 SIGLEC10Q96LC7 697 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 C2orf40Q9H1Z8 148 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 RAD21L1Q9H4I0 556 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 CYP3A43Q9HB55 503 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 HMG20AQ9NP66 347 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 SLC17A6Q9P2U8 582 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 PSME2Q9UL46 239 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 ZNF214Q9UL59 606 aaPredicted RBP13.28□□□□□ -0.28
NUP54-201ENST00000264883 TCAF1Q9Y4C2 921 aa13.28□□□□□ -0.28
NUP54-201ENST00000264883 IGKV6D-21A0A0A0MT36 114 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 TCRBV3S1A0A5B6 114 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 DLGAP1O14490 977 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 DPYSL4O14531 572 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 PAPSS1O43252 624 aaPredicted RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 MSI1O43347 362 aaKnown RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 HOXC6P09630 235 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 BMP2P12643 396 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 ATP6V0D1P61421 351 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 OCA2Q04671 838 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 PTPN11Q06124 597 aaPredicted RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 FAM102AQ5T9C2 384 aaPredicted RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 ABRAXAS1Q6UWZ7 409 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 CYP2R1Q6VVX0 501 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 SCARA5Q6ZMJ2 495 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 ANKRD13BQ86YJ7 626 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 CAMK1DQ8IU85 385 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 CBR4Q8N4T8 237 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 TTC39CQ8N584 583 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 PCDH20Q8N6Y1 951 aaKnown RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 PACRGLQ8N7B6 248 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 DUS3LQ96G46 650 aaKnown RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 PEBP4Q96S96 227 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 ZNF670Q9BS34 389 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 ZNF385DQ9H6B1 395 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 ZBTB26Q9HCK0 441 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 MOCS1Q9NZB8 636 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 SLC27A5Q9Y2P5 690 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 CSADQ9Y600 493 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 E2F8A0AVK6 867 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 A6NL46 340 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 C2CD4BA6NLJ0 364 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 MSCO60682 206 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 ALDH1A2O94788 518 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 FARP2O94887 1054 aaPredicted RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 EDN1P05305 212 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 VDRP11473 427 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 TGM1P22735 817 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 ADORA2AP29274 412 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 SP4Q02446 784 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 MMRN1Q13201 1228 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 DNASE1L3Q13609 305 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 TARBP2Q15633 366 aaKnown RBP13.27□□□□□ -0.29
NUP54-201ENST00000264883 SLC36A3Q495N2 470 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 TMEM198Q66K66 360 aa13.27□□□□□ -0.29
NUP54-201ENST00000264883 NXNQ6DKJ4 435 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms