RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
COL5A3-201ENST00000264828 NT5DC4Q86YG4 428 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 MTG1Q9BT17 334 aaPredicted RBP18.17■□□□□ 0.5
COL5A3-201ENST00000264828 DGKAP23743 735 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 NTSP30990 170 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 ST3GAL1Q11201 340 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 CYP2A13Q16696 494 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 FAM183BPQ6ZVS7 135 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 AMIGO2Q86SJ2 522 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 PDCD10Q9BUL8 212 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 TMEM138Q9NPI0 162 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 VPS51Q9UID3 782 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 ANKDD1BA6NHY2 528 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 KHDRBS3O75525 346 aaKnown RBP18.17■□□□□ 0.5
COL5A3-201ENST00000264828 MTA2O94776 668 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 ADSSP30520 456 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 NEPROQ6NW34 567 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 TTC27Q6P3X3 843 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 CLYBLQ8N0X4 340 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 PDGFDQ9GZP0 370 aaPredicted RBP18.17■□□□□ 0.5
COL5A3-201ENST00000264828 POLR1EQ9GZS1 481 aaKnown RBP18.17■□□□□ 0.5
COL5A3-201ENST00000264828 STARD7Q9NQZ5 370 aa18.17■□□□□ 0.5
COL5A3-201ENST00000264828 SCAMP3O14828 347 aaKnown RBP18.16■□□□□ 0.5
COL5A3-201ENST00000264828 LIASO43766 372 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 BIKQ13323 160 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 MAMLD1Q13495 774 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 GNA13Q14344 377 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 MARK2Q7KZI7 788 aaKnown RBP18.16■□□□□ 0.5
COL5A3-201ENST00000264828 KCTD4Q8WVF5 259 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 LRMDAQ9H2I8 198 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 CRISPLD1Q9H336 500 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 SPAG4Q9NPE6 437 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 MBD2Q9UBB5 411 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 CYP4B1P13584 511 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 POM121L1PQ3SYA9 428 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 TIMM50Q3ZCQ8 353 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 PCID2Q5JVF3 399 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 HYIQ5T013 277 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 TMEM63BQ5T3F8 832 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 LZTR1Q8N653 840 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 GLIS3Q8NEA6 775 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 STARD8Q92502 1023 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 TMEM216Q9P0N5 145 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 ASTN2O75129 1339 aaPredicted RBP18.16■□□□□ 0.5
COL5A3-201ENST00000264828 KPNA3O00505 521 aaPredicted RBP18.16■□□□□ 0.5
COL5A3-201ENST00000264828 PRG2P13727 222 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 ATP13A4Q4VNC1 1196 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 SPDYCQ5MJ68 293 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 KCNK18Q7Z418 384 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 R3HCC1LQ7Z5L2 792 aaKnown RBP18.16■□□□□ 0.5
COL5A3-201ENST00000264828 GRIN3AQ8TCU5 1115 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 ELMO1Q92556 727 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 PTGFRNQ9P2B2 879 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 STX11O75558 287 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 RECQL5O94762 991 aaPredicted RBP18.16■□□□□ 0.5
COL5A3-201ENST00000264828 KLRC2P26717 231 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 GPAT3Q53EU6 434 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 REPS2Q8NFH8 660 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 CRNNQ9UBG3 495 aaPredicted RBP18.16■□□□□ 0.5
COL5A3-201ENST00000264828 FRMPD4Q14CM0 1322 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 MEA1Q16626 185 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 ZNF549Q6P9A3 640 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 BRSK2Q8IWQ3 736 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 EEF1AKMT1Q8WVE0 214 aa18.16■□□□□ 0.5
COL5A3-201ENST00000264828 TRMT13Q9NUP7 481 aaKnown RBP18.16■□□□□ 0.5
COL5A3-201ENST00000264828 BCL9O00512 1426 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 RPL38P63173 70 aaKnown RBP18.15■□□□□ 0.5
COL5A3-201ENST00000264828 MTAPQ13126 283 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 SLC4A5Q9BY07 1137 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 IL22Q9GZX6 179 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 SLC12A4Q9UP95 1085 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 LYPLA1O75608 230 aaPredicted RBP18.15■□□□□ 0.5
COL5A3-201ENST00000264828 DDNO94850 711 aaPredicted RBP18.15■□□□□ 0.5
COL5A3-201ENST00000264828 CST1P01037 141 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 PSMD4P55036 377 aaKnown RBP18.15■□□□□ 0.5
COL5A3-201ENST00000264828 SIX5Q8N196 739 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 ALLCQ8N6M5 410 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 BTBD9Q96Q07 612 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 LINC00032P0C843 101 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 ABL2P42684 1182 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 PIK3CGP48736 1102 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 FOLH1Q04609 750 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 MFSD10Q14728 455 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 QPRTQ15274 297 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 DNERQ8NFT8 737 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 TINF2Q9BSI4 451 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 ADM5C9JUS6 153 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 EIF4BP23588 611 aaKnown RBP18.15■□□□□ 0.5
COL5A3-201ENST00000264828 RCVRNP35243 200 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 HIRAP54198 1017 aaPredicted RBP18.15■□□□□ 0.5
COL5A3-201ENST00000264828 LGALS3BPQ08380 585 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 HSPA14Q0VDF9 509 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 PREPLQ4J6C6 727 aaPredicted RBP18.15■□□□□ 0.5
COL5A3-201ENST00000264828 STXBP5Q5T5C0 1151 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 LRRC49Q8IUZ0 686 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 BAP1Q92560 729 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 MECRQ9BV79 373 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 SPATC1LQ9H0A9 340 aa18.15■□□□□ 0.5
COL5A3-201ENST00000264828 BLOC1S4Q9NUP1 217 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms