RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 GPC2Q8N158 579 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 UBR7Q8N806 425 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 SAMD4AQ9UPU9 718 aaKnown RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 GLUD1P00367 558 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 VIL1P09327 827 aaKnown RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 CYP2C18P33260 490 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 PPIGQ13427 754 aaKnown RBP eCLIP16.67■□□□□ 0.261e-6■■□□□ 12.1
USP13-201ENST00000263966 TUBB3Q13509 450 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 FBXO33Q7Z6M2 555 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 SPATA20Q8TB22 786 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 ITFG1Q8TB96 612 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 MTRRQ9UBK8 725 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 C9J4A7 227 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 NEK3P51956 506 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 USP4Q13107 963 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 SF1Q15637 639 aaKnown RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 MSANTD1Q6ZTZ1 278 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 GET4Q7L5D6 327 aaPredicted RBP16.67■□□□□ 0.26
USP13-201ENST00000263966 MAGEB18Q96M61 343 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 ASB8Q9H765 288 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 CNGB3Q9NQW8 809 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 BLKP51451 505 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 FAM118BQ9BPY3 351 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 PCDHGA3Q9Y5H0 932 aa16.67■□□□□ 0.26
USP13-201ENST00000263966 KLHL41O60662 606 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 ACAT1P24752 427 aaKnown RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 GRSF1Q12849 480 aaKnown RBP eCLIP16.66■□□□□ 0.26
USP13-201ENST00000263966 ZFP1Q6P2D0 407 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 ZNF483Q8TF39 744 aaPredicted RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 PTCD2Q8WV60 388 aaKnown RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 RXFP2Q8WXD0 754 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 APOL2Q9BQE5 337 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 IL22Q9GZX6 179 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 TBL1XO60907 577 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 INSRRP14616 1297 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 FMO4P31512 558 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 OAZ1P54368 228 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 MRPS22P82650 360 aaKnown RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 DMTNQ08495 405 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 ZDHHC20Q5W0Z9 365 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 RIPOR1Q6ZS17 1223 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 SEC16BQ96JE7 1060 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 MOCS1Q9NZB8 636 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 LRRC72A6NJI9 287 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 A8MX80 341 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 CXCL14O95715 111 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 VIPP01282 170 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 BUD31P41223 144 aaPredicted RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 UGT2B15P54855 530 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 ZCCHC12Q6PEW1 402 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 C5orf34Q96MH7 638 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 SEPHS2Q99611 448 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 POLMQ9NP87 494 aaPredicted RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 NQO1P15559 274 aaKnown RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 NPR3P17342 541 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 ACLYP53396 1101 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 SCRN3Q0VDG4 424 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 ORC1Q13415 861 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 MTM1Q13496 603 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 RBM23Q86U06 439 aaKnown RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 ZC3H7AQ8IWR0 971 aaKnown RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 REPS2Q8NFH8 660 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 EIF2S3P41091 472 aaKnown RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 POM121L1PQ3SYA9 428 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 FBXO36Q8NEA4 188 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 C9orf16Q9BUW7 83 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 TCF7L2Q9NQB0 619 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 NKIRAS2Q9NYR9 191 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 TULP4Q9NRJ4 1543 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 LARGE1O95461 756 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 S100A1P23297 94 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 NAB1Q13506 487 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 LIX1Q8N485 282 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 SLC38A3Q99624 504 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 CHMP1AQ9HD42 196 aaPredicted RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 SEMA3DO95025 777 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 BDNFP23560 247 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 KAT5Q92993 513 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 FATE1Q969F0 183 aa16.66■□□□□ 0.26
USP13-201ENST00000263966 PRICKLE1Q96MT3 831 aaPredicted RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 BHLHE41Q9C0J9 482 aaPredicted RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 PHPT1Q9NRX4 125 aaPredicted RBP16.66■□□□□ 0.26
USP13-201ENST00000263966 CCDC162PA2VCL2 907 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 PPP1R37O75864 691 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 LDLRP01130 860 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 DGUOKQ16854 277 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 GJD3Q8N144 294 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 ANKFN1Q8N957 763 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 C18orf25Q96B23 403 aaPredicted RBP16.65■□□□□ 0.26
USP13-201ENST00000263966 CCT8L2Q96SF2 557 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 CRTAC1Q9NQ79 661 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 UBAP1Q9NZ09 502 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 SPEF1Q9Y4P9 236 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 ENTPD5O75356 428 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 SLC1A6P48664 564 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 CDC42P60953 191 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 RFTN2Q52LD8 501 aaPredicted RBP16.65■□□□□ 0.26
USP13-201ENST00000263966 GMCL1P1Q8NEA9 526 aa16.65■□□□□ 0.26
USP13-201ENST00000263966 JMJD4Q9H9V9 463 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms