RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 MAGOHP61326 146 aaKnown RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 DSC2Q02487 901 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 PPIDQ08752 370 aaKnown RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 ELP6Q0PNE2 266 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 ANKRD54Q6NXT1 300 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 PRUNE1Q86TP1 453 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 ZNF567Q8N184 647 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 EIF1ADQ8N9N8 165 aaKnown RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 FGF13Q92913 245 aa8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 PPARGC1AQ9UBK2 798 aaKnown RBP8.38□□□□□ -1.07
GTF3C3-201ENST00000263956 B4GALT3O60512 393 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TMCC1O94876 653 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 IGHA2P01877 340 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 CTPS1P17812 591 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 GTF2F1P35269 517 aaKnown RBP eCLIP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 HSD17B3P37058 310 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 PSMD8P48556 350 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 THOP1P52888 689 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 RUNX3Q13761 415 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 CARD16Q5EG05 197 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 NXNQ6DKJ4 435 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ZNF783Q6ZMS7 281 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 STRA8Q7Z7C7 330 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 C12orf50Q8NA57 414 aaPredicted RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 AZIN2Q96A70 460 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ULK4Q96C45 1275 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 CABS1Q96KC9 395 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 PLCD4Q9BRC7 762 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 CAPS2Q9BXY5 557 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 SLC46A2Q9BY10 475 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ADAM33Q9BZ11 813 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 VIPAS39Q9H9C1 493 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ZNF334Q9HCZ1 680 aaPredicted RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 IRAK4Q9NWZ3 460 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 APPL1Q9UKG1 709 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 RRP9O43818 475 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ATG13O75143 517 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 GFAPP14136 432 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ACVRL1P37023 503 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 SLC7A9P82251 487 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 DHCR24Q15392 516 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 MROH9Q5TGP6 573 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 SLC9A4Q6AI14 798 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 KCNMB4Q86W47 210 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 DCLK2Q8N568 766 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 PCDH20Q8N6Y1 951 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 CCNYL1Q8N7R7 359 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 HNRNPLLQ8WVV9 542 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 CD101Q93033 1021 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TCEAL4Q96EI5 215 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 MYRFLQ96LU7 910 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 LIMD1Q9UGP4 676 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ERVW-1Q9UQF0 538 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 MYH15Q9Y2K3 1946 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3DA0A087WVF3 549 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3IA0A087WXS9 549 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3EA0A087X179 549 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3KA0A087X1G2 549 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3FA6NER0 549 aaPredicted RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3LB9A6J9 549 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TRIM49D1C9J1S8 452 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 SNAP91O60641 907 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 RNASEH2AO75792 299 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3HP0C7X1 549 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 PIRTP0C851 137 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TIE1P35590 1138 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 CD151P48509 253 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 LRRC32Q14392 662 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 GALNT3Q14435 633 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 PIK3R6Q5UE93 754 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 DUPD1Q68J44 220 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3GQ6DHY5 549 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3CQ6IPX1 549 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 NEPROQ6NW34 567 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 RSPO2Q6UXX9 243 aaPredicted RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 SLC26A11Q86WA9 606 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TBC1D3Q8IZP1 549 aaPredicted RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 SLC35B2Q8TB61 432 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 CENPIQ92674 756 aaPredicted RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 FEM1CQ96JP0 617 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 P2RY13Q9BPV8 354 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 GDF3Q9NR23 364 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ERICH4A6NGS2 130 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 GOLGA8RI6L899 631 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 EBAG9O00559 213 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 KDELR3O43731 214 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TRIM16O95361 564 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 HSPA4LO95757 839 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 SYF2O95926 243 aaKnown RBP8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ELFN1P0C7U0 828 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TPSB2P20231 275 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 CLCN4P51793 760 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ZNF33AQ06730 810 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 GALNT2Q10471 571 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 TPSAB1Q15661 275 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 MAP7D1Q3KQU3 841 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 PLEKHG6Q3KR16 790 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 ALFQ53S48 1182 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 HSP90AA5PQ58FG0 334 aa8.37□□□□□ -1.07
GTF3C3-201ENST00000263956 PITRM1Q5JRX3 1037 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms