RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 TJP3O95049 919 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 APOC2P02655 101 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 ZBTB17Q13105 803 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 KLF1Q13351 362 aaPredicted RBP18.61■□□□□ 0.57
SDF4-201ENST00000263741 CST6Q15828 149 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 FAM124AQ86V42 546 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 CCDC13Q8IYE1 715 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 CARD9Q9H257 536 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 CYP8B1Q9UNU6 501 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 WASF2Q9Y6W5 498 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 WDR87Q6ZQQ6 2873 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 MCF2LO15068 1137 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 IGSF6O95976 241 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 CHRNA3P32297 505 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 MMP13P45452 471 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 PDK1Q15118 436 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 NOMO1Q15155 1222 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 ARSIQ5FYB1 569 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 PIP4K2CQ8TBX8 421 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 CASKIN2Q8WXE0 1202 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 ATG4AQ8WYN0 398 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 VOPP1Q96AW1 172 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 ISG20Q96AZ6 181 aaKnown RBP18.61■□□□□ 0.57
SDF4-201ENST00000263741 NSMCE3Q96MG7 304 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 GDAP1L1Q96MZ0 367 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 TSGA13Q96PP4 275 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 NT5MQ9NPB1 228 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 IL36AQ9UHA7 158 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 EFR3BQ9Y2G0 817 aa18.61■□□□□ 0.57
SDF4-201ENST00000263741 PPP1R12AO14974 1030 aaPredicted RBP18.6■□□□□ 0.57
SDF4-201ENST00000263741 ZBTB24O43167 697 aaPredicted RBP18.6■□□□□ 0.57
SDF4-201ENST00000263741 LEFTY1O75610 366 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 GSRP00390 522 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 NUBP1P53384 320 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 NRLP54845 237 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 SNRPD1P62314 119 aaKnown RBP18.6■□□□□ 0.57
SDF4-201ENST00000263741 LONP2Q86WA8 852 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 AADATQ8N5Z0 425 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 CCDC114Q96M63 670 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 ZNF599Q96NL3 588 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 SEPT3Q9UH03 358 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 FRYLO94915 3013 aa18.6■□□□□ 0.57
SDF4-201ENST00000263741 CXorf51AA0A1B0GTR3 108 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 KPNA3O00505 521 aaPredicted RBP18.59■□□□□ 0.57
SDF4-201ENST00000263741 MATN3O15232 486 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 CEP104O60308 925 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 PIGNO95427 931 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 CCNB1P14635 433 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 CCNCP24863 283 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 HOXA6P31267 233 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 SLC8A1P32418 973 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 NR2C2P49116 596 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 FAM193AP78312 1265 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 PRKD1Q15139 912 aaPredicted RBP18.59■□□□□ 0.57
SDF4-201ENST00000263741 MARC1Q5VT66 337 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 TIGD7Q6NT04 549 aaPredicted RBP18.59■□□□□ 0.57
SDF4-201ENST00000263741 SLC13A5Q86YT5 568 aaPredicted RBP18.59■□□□□ 0.57
SDF4-201ENST00000263741 NSMCE1Q8WV22 266 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 MAML1Q92585 1016 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 NELL1Q92832 810 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 ZSCAN32Q9NX65 697 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 SMARCAL1Q9NZC9 954 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 PPM1HQ9ULR3 514 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 A0A1W2PP55 124 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 H7C0C1 242 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 RNASEH1O60930 286 aaKnown RBP18.59■□□□□ 0.57
SDF4-201ENST00000263741 DNTTP04053 509 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 HLA-DQB2P05538 268 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 ACADMP11310 421 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 BCKDHBP21953 392 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 ATP5OP48047 213 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 TPMTP51580 245 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 RFTN1Q14699 578 aaPredicted RBP18.59■□□□□ 0.57
SDF4-201ENST00000263741 ZNF528Q3MIS6 628 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 METTL3Q86U44 580 aaKnown RBP18.59■□□□□ 0.57
SDF4-201ENST00000263741 WDR5BQ86VZ2 330 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 LRRC49Q8IUZ0 686 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 GANCQ8TET4 914 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 TFB1MQ8WVM0 346 aaKnown RBP18.59■□□□□ 0.57
SDF4-201ENST00000263741 MS4A14Q96JA4 679 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 QKIQ96PU8 341 aaKnown RBP eCLIP18.59■□□□□ 0.57
SDF4-201ENST00000263741 PSKH2Q96QS6 385 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 HEPHQ9BQS7 1158 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 FBRSQ9HAH7 460 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 RBM22Q9NW64 420 aaKnown RBP eCLIP18.59■□□□□ 0.575e-6■■■■■ 31.7
SDF4-201ENST00000263741 FARP1Q9Y4F1 1045 aaPredicted RBP18.59■□□□□ 0.57
SDF4-201ENST00000263741 LRRK1Q38SD2 2015 aa18.59■□□□□ 0.57
SDF4-201ENST00000263741 TNRC6BQ9UPQ9 1833 aaKnown RBP18.58■□□□□ 0.57
SDF4-201ENST00000263741 JCHAINP01591 159 aa18.58■□□□□ 0.57
SDF4-201ENST00000263741 UGT2B4P06133 528 aa18.58■□□□□ 0.57
SDF4-201ENST00000263741 SCNN1BP51168 640 aa18.58■□□□□ 0.57
SDF4-201ENST00000263741 EIF3EP60228 445 aaKnown RBP18.58■□□□□ 0.57
SDF4-201ENST00000263741 MYLK3Q32MK0 819 aa18.58■□□□□ 0.57
SDF4-201ENST00000263741 MAP7D1Q3KQU3 841 aa18.58■□□□□ 0.57
SDF4-201ENST00000263741 COG1Q8WTW3 980 aa18.58■□□□□ 0.57
SDF4-201ENST00000263741 ARRDC3Q96B67 414 aa18.58■□□□□ 0.57
SDF4-201ENST00000263741 PABPC3Q9H361 631 aaKnown RBP18.58■□□□□ 0.57
SDF4-201ENST00000263741 HCN4Q9Y3Q4 1203 aa18.58■□□□□ 0.57
SDF4-201ENST00000263741 F5H423 210 aaPredicted RBP18.58■□□□□ 0.56
SDF4-201ENST00000263741 ZNF185O15231 689 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms