RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 C3orf58Q8NDZ4 430 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 ZMIZ2Q8NF64 920 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 RNF217Q8TC41 542 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 LRTOMTQ8WZ04 291 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 JADE3Q92613 823 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 EMID1Q96A84 441 aaPredicted RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 SENP8Q96LD8 212 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 ZNF512Q96ME7 567 aaPredicted RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 ZNF560Q96MR9 790 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 SIKE1Q9BRV8 207 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 FAM192AQ9GZU8 254 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 GBA3Q9H227 469 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 EIF2B3Q9NR50 452 aaKnown RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 E7ENX8 843 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 F8W810 466 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 PDHXO00330 501 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 DDHD2O94830 711 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 SEC24DO94855 1032 aaPredicted RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 MYL3P08590 195 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 UGT1A6P19224 532 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 SLC12A2P55011 1212 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 SNAPC2Q13487 334 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 HNRNPDQ14103 355 aaKnown RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 PTPRCAPQ14761 206 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 KYAT1Q16773 422 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 GEN1Q17RS7 908 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 RARS2Q5T160 578 aaKnown RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 ALKAL1Q6UXT8 129 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 TRIM67Q6ZTA4 783 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 CYS1Q717R9 158 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 ZBTB46Q86UZ6 589 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 IFNLR1Q8IU57 520 aaPredicted RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 TMEM209Q96SK2 561 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 HNRNPABQ99729 332 aaKnown RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 CIB1Q99828 191 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 DRC3Q9H069 523 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 STN1Q9H668 368 aaKnown RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 DNAJB4Q9UDY4 337 aa9.24□□□□□ -0.93
MSH4-201ENST00000263187 FNDC3AQ9Y2H6 1198 aaKnown RBP9.24□□□□□ -0.93
MSH4-201ENST00000263187 FAM149AA5PLN7 773 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PPP6CO00743 305 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PTGESO14684 152 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 HNRNPRO43390 633 aaKnown RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 GJB3O75712 270 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 CD4P01730 458 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 TFAP2AP05549 437 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 SMIM18P0DKX4 95 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 ALOX15P16050 662 aaPredicted RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 STMN1P16949 149 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 CKMT2P17540 419 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 ME2P23368 584 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 CDH15P55291 814 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 DAOAP59103 153 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 MYBPC1Q00872 1141 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 CDK18Q07002 472 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PPIDQ08752 370 aaKnown RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 CDH17Q12864 832 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 ZNF792Q3KQV3 632 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 SV2CQ496J9 727 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 MTX3Q5HYI7 312 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 TSTD2Q5T7W7 516 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 C16orf89Q6UX73 402 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 ZYG11AQ6WRX3 759 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PDZD4Q76G19 769 aaPredicted RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 TAC4Q86UU9 113 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 TMIGD2Q96BF3 282 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 LRCH3Q96II8 777 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 KLHL5Q96PQ7 755 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 SERPINI1Q99574 410 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 C1QTNF1Q9BXJ1 281 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 FSD1LQ9BXM9 530 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 CPA4Q9UI42 421 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 FBXW11Q9UKB1 542 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 CRYL1Q9Y2S2 319 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 V9GYQ6 96 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 NRCAMQ92823 1304 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 H3BSA7 217 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 CXCL11O14625 94 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 POMCP01189 267 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PYGLP06737 847 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PIRTP0C851 137 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 RPS6KA3P51812 740 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 C1QTNF8P60827 252 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 MYLK3Q32MK0 819 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PIGGQ5H8A4 983 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 OGFRL1Q5TC84 451 aaPredicted RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 KCTD11Q693B1 232 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 FAM35AQ86V20 835 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 ZNF410Q86VK4 478 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 SMG8Q8ND04 991 aaKnown RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 OR6P1Q8NGX9 317 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 CEP70Q8NHQ1 597 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 B4GALNT2Q8NHY0 566 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PDCD6IPQ8WUM4 868 aaKnown RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 SLC10A4Q96EP9 437 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 TEKT5Q96M29 485 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 MRPL1Q9BYD6 325 aaKnown RBP9.23□□□□□ -0.93
MSH4-201ENST00000263187 IL22Q9GZX6 179 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 OSBPL2Q9H1P3 480 aa9.23□□□□□ -0.93
MSH4-201ENST00000263187 PIF1Q9H611 641 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms