RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RIBC1Q8N443 379 aaPredicted RBP23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 SMARCD2Q92925 531 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 C2orf49Q9BVC5 232 aaPredicted RBP23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 IL22Q9GZX6 179 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 ARNT2Q9HBZ2 717 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 GDE1Q9NZC3 331 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 LMCD1Q9NZU5 365 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 BCCIPQ9P287 314 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 SLC24A2Q9UI40 661 aa23.21■■□□□ 1.31
SMARCB1-201ENST00000263121 GJB3O75712 270 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 TMCC1O94876 653 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 RGRP47804 291 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 EFTUD2Q15029 972 aaKnown RBP eCLIP23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 RASA2Q15283 850 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 PLEKHG6Q3KR16 790 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 LY6G5CQ5SRR4 150 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 GET4Q7L5D6 327 aaPredicted RBP23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 ACDQ96AP0 544 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 CYTH2Q99418 400 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 DHRS4Q9BTZ2 278 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 BBS2Q9BXC9 721 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 CTNNAL1Q9UBT7 734 aa23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 INTS6Q9UL03 887 aaKnown RBP23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 NOVA2Q9UNW9 492 aaKnown RBP23.2■■□□□ 1.3
SMARCB1-201ENST00000263121 NEDD8-MDP1E9PL57 170 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 PRKCHP24723 683 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 VIPR2P41587 438 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 GEMIN4P57678 1058 aaKnown RBP23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 PCSK7Q16549 785 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 CYS1Q717R9 158 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 TRPV4Q9HBA0 871 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 SAMD15Q9P1V8 674 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 CXorf51AA0A1B0GTR3 108 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 POC1B-GALNT4F8VUJ3 575 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 ALDH1A2O94788 518 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 TYRP14679 529 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 TPH1P17752 444 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 HLA-FP30511 346 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 CBX1P83916 185 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 ZNF557Q8N988 423 aaPredicted RBP23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 OSCP1Q8WVF1 389 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 ABCB8Q9NUT2 735 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 MOCS1Q9NZB8 636 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 CLEC1BQ9P126 229 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 LHX3Q9UBR4 397 aa23.19■■□□□ 1.3
SMARCB1-201ENST00000263121 LOC285095A0A1B0GVY8 99 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 MAGEB16A2A368 324 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 CES1P23141 567 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 CRYMQ14894 314 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 KBTBD12Q3ZCT8 623 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 ASTLQ6HA08 431 aaPredicted RBP23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 RETSATQ6NUM9 610 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 TMEM135Q86UB9 458 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 STMN4Q9H169 189 aaPredicted RBP23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 DUS2Q9NX74 493 aaKnown RBP23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 OBP2AQ9NY56 170 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 SOX13Q9UN79 622 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 MIA3Q5JRA6 1907 aa23.18■■□□□ 1.3
SMARCB1-201ENST00000263121 FAM237BA0A1B0GVD1 139 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 ATP9BO43861 1147 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 POLBP06746 335 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 SERPINF2P08697 491 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 CHRNA4P43681 627 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 EML3Q32P44 896 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 PITRM1Q5JRX3 1037 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 SPANXN3Q5MJ09 141 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 TRMT10BQ6PF06 316 aaKnown RBP23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 BPIFB1Q8TDL5 484 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 FEM1CQ96JP0 617 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 NSMCE3Q96MG7 304 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 NUDCD1Q96RS6 583 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 PAFAH2Q99487 392 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 S1PR5Q9H228 398 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 NOD2Q9HC29 1040 aa23.17■■□□□ 1.3
SMARCB1-201ENST00000263121 FAM159BA6NKW6 160 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 INSIG1O15503 277 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 PIAS1O75925 651 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 USP1O94782 785 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 MT-CO1P00395 513 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 FCARP24071 287 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 RGS19P49795 217 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 SERPINH1P50454 418 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 MAGOHP61326 146 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 NSUN2Q08J23 767 aaKnown RBP eCLIP23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 SLC1A5Q15758 541 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 KDELC2Q7Z4H8 507 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 CYP4X1Q8N118 509 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 FAM76AQ8TAV0 307 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 EXOC2Q96KP1 924 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 KIFC1Q9BW19 673 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 PSMC3IPQ9P2W1 217 aaPredicted RBP23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 CDH7Q9ULB5 785 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 RPS6KL1Q9Y6S9 549 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 MYOFQ9NZM1 2061 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 KIF26AQ9ULI4 1882 aaPredicted RBP23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 RRP9O43818 475 aaKnown RBP23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 TBX10O75333 385 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 EPOP01588 193 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 CYP17A1P05093 508 aa23.16■■□□□ 1.3
SMARCB1-201ENST00000263121 ATXN1LP0C7T5 689 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms