RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CCDC88AQ3V6T2 1871 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 SMIM31A0A1B0GVY4 71 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 M0QZ92 97 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 MAFO75444 373 aaPredicted RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 RHOBTB1O94844 696 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 NR1H2P55055 460 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 TAS2R39P59534 338 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 CDKL1Q00532 357 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 DDX39BQ13838 428 aaKnown RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 NOL6Q9H6R4 1146 aaKnown RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 MARCH7Q9H992 704 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 SPON1Q9HCB6 807 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 CD274Q9NZQ7 290 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 GRIA2P42262 883 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 PWP1Q13610 501 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 CCDC85BQ15834 202 aaPredicted RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 CCDC153Q494R4 210 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 TRNP1Q6NT89 227 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 DRICH1Q6PGQ1 229 aaPredicted RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 ADCK1Q86TW2 530 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 SNX29P2Q8IUI4 249 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 PSTKQ8IV42 348 aaKnown RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 MICU2Q8IYU8 434 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 OR6J1Q8NGC5 347 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 PPM1MQ96MI6 270 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 SIRPGQ9P1W8 387 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 COL18A1P39060 1754 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 A0A1W2PQ67 120 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 FAM72CH0Y354 149 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 CHEK2O96017 543 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 ASLP04424 464 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 ABCB1P08183 1280 aaPredicted RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 HGFP14210 728 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 PSMB9P28065 219 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 PCSK6P29122 969 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 CD151P48509 253 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 KPNA2P52292 529 aaKnown RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 RAP1GDS1P52306 607 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 KCNK10P57789 538 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 NR1D2Q14995 579 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 POLD3Q15054 466 aaPredicted RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 GPR158Q5T848 1215 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 FAM72AQ5TYM5 149 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 FAM72DQ6L9T8 149 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 NEPROQ6NW34 567 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 TMEM26Q6ZUK4 368 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 FAM72BQ86X60 149 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 CLHC1Q8NHS4 586 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 DDI1Q8WTU0 396 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 ZC3H15Q8WU90 426 aaKnown RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 GFM2Q969S9 779 aaKnown RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 MIR1-1HGQ9H1L0 117 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 UBAP1Q9NZ09 502 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 EVLQ9UI08 416 aaPredicted RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 IPO11Q9UI26 975 aaKnown RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 ITGA11Q9UKX5 1188 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 ZNF214Q9UL59 606 aaPredicted RBP10.22□□□□□ -0.77
PALB2-201ENST00000261584 CDC14AQ9UNH5 594 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 TIAM2Q8IVF5 1701 aa10.22□□□□□ -0.77
PALB2-201ENST00000261584 FFAR3O14843 346 aa10.21□□□□□ -0.77
PALB2-201ENST00000261584 MDM4O15151 490 aa10.21□□□□□ -0.77
PALB2-201ENST00000261584 GPR42O15529 346 aa10.21□□□□□ -0.77
PALB2-201ENST00000261584 ESRRBO95718 433 aa10.21□□□□□ -0.77
PALB2-201ENST00000261584 FASP25445 335 aa10.21□□□□□ -0.77
PALB2-201ENST00000261584 L1CAMP32004 1257 aa10.21□□□□□ -0.77
PALB2-201ENST00000261584 LAPTM4AQ15012 233 aa10.21□□□□□ -0.77
PALB2-201ENST00000261584 PTGR2Q8N8N7 351 aaPredicted RBP10.21□□□□□ -0.77
PALB2-201ENST00000261584 FRMD8Q9BZ67 464 aaPredicted RBP10.21□□□□□ -0.77
PALB2-201ENST00000261584 ZFYVE28Q9HCC9 887 aa10.21□□□□□ -0.77
PALB2-201ENST00000261584 RAP2CQ9Y3L5 183 aa10.21□□□□□ -0.77
PALB2-201ENST00000261584 COPG1Q9Y678 874 aaKnown RBP10.21□□□□□ -0.77
PALB2-201ENST00000261584 KLHL33A6NCF5 533 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 LRRC14BA6NHZ5 514 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 TRPC5OSA6NMA1 111 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 BIRC5O15392 142 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 HSMCR30P0CW71 290 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 TAF6P49848 677 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 KPNA1P52294 538 aaPredicted RBP10.21□□□□□ -0.78
PALB2-201ENST00000261584 INHBCP55103 352 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 MSLNQ13421 630 aaPredicted RBP10.21□□□□□ -0.78
PALB2-201ENST00000261584 AAGABQ6PD74 315 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 CNSTQ6PJW8 725 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 BRD8Q9H0E9 1235 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 XYLT2Q9H1B5 865 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 RNF39Q9H2S5 420 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 EML4Q9HC35 981 aaKnown RBP10.21□□□□□ -0.78
PALB2-201ENST00000261584 BPIFA1Q9NP55 256 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 STK39Q9UEW8 545 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 TRAFD1O14545 582 aaPredicted RBP10.21□□□□□ -0.78
PALB2-201ENST00000261584 CCNT2O60583 730 aaKnown RBP10.21□□□□□ -0.78
PALB2-201ENST00000261584 FKBP9O95302 570 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 DLGAP3O95886 979 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 BCL10O95999 233 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 S100BP04271 92 aaPredicted RBP10.21□□□□□ -0.78
PALB2-201ENST00000261584 SEPHS1P49903 392 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 RAD23AP54725 363 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 IL5RAQ01344 420 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 CDH17Q12864 832 aa10.21□□□□□ -0.78
PALB2-201ENST00000261584 ADGRE1Q14246 886 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms