RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TINF2Q9BSI4 451 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 IL22Q9GZX6 179 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 REEP1Q9H902 201 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 E7ENQ6 273 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 TP73O15350 636 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 PSMD10O75832 226 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 CYP3A4P08684 503 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 GRIA4P48058 902 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 CASP7P55210 303 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 IRF8Q02556 426 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 KYAT3Q6YP21 454 aaKnown RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 RIOX2Q8IUF8 465 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 ALLCQ8N6M5 410 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 ACO2Q99798 780 aaKnown RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 GRIP2Q9C0E4 1043 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 MAT2BQ9NZL9 334 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 NDUFA13Q9P0J0 144 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 LOC100506127A0A0U1RQW1 187 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 AVILO75366 819 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 ANXA5P08758 320 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 CD52P31358 61 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 ZNF143P52747 638 aaPredicted RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 RPL38P63173 70 aaKnown RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 PREPLQ4J6C6 727 aaPredicted RBP12.22□□□□□ -0.45
COL8A1-201ENST00000261037 DHRSXQ8N5I4 330 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 DNAJB14Q8TBM8 379 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 C9orf16Q9BUW7 83 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 SLC25A23Q9BV35 468 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 SLITRK2Q9H156 845 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 TPRKBQ9Y3C4 175 aa12.22□□□□□ -0.45
COL8A1-201ENST00000261037 ADGRB2O60241 1585 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 CDK7P50613 346 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 SNRPD1P62314 119 aaKnown RBP12.21□□□□□ -0.45
COL8A1-201ENST00000261037 CAPSQ13938 189 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 GNA13Q14344 377 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 IL17AQ16552 155 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 UGCGQ16739 394 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 GCNT7Q6ZNI0 430 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 STK40Q8N2I9 435 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 SETD9Q8NE22 299 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 ZNF558Q96NG5 402 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 C1orf50Q9BV19 199 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 ANAPC2Q9UJX6 822 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 NT5C1B-RDH14C9J2C7 533 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 PSMD11O00231 422 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 LRATO95237 230 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 LINC00032P0C843 101 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 HDCP19113 662 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 GRIA3P42263 894 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 DDR1Q08345 913 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 RALGDSQ12967 914 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 BIKQ13323 160 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 ACAP1Q15027 740 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 KCTD21Q4G0X4 260 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 SAMD4BQ5PRF9 694 aaKnown RBP12.21□□□□□ -0.45
COL8A1-201ENST00000261037 ZDHHC13Q8IUH4 622 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 ST13P5Q8NFI4 369 aaPredicted RBP12.21□□□□□ -0.45
COL8A1-201ENST00000261037 ENKURQ8TC29 256 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 FERD3LQ96RJ6 166 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 VAT1Q99536 393 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 MRPL45Q9BRJ2 306 aaKnown RBP12.21□□□□□ -0.45
COL8A1-201ENST00000261037 C1QTNF7Q9BXJ2 289 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 IDI2Q9BXS1 227 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 ZYG11BQ9C0D3 744 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 NRDE2Q9H7Z3 1164 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 ASTN2O75129 1339 aaPredicted RBP12.21□□□□□ -0.45
COL8A1-201ENST00000261037 NRCAMQ92823 1304 aa12.21□□□□□ -0.45
COL8A1-201ENST00000261037 BCLAF3A2AJT9 711 aaKnown RBP12.21□□□□□ -0.46
COL8A1-201ENST00000261037 IRF6O14896 467 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 PSMG1O95456 288 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 ITGAXP20702 1163 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 C4BPBP20851 252 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 RPL22P35268 128 aaKnown RBP12.21□□□□□ -0.46
COL8A1-201ENST00000261037 AFTPHQ6ULP2 937 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 ZCCHC7Q8N3Z6 543 aaKnown RBP12.21□□□□□ -0.46
COL8A1-201ENST00000261037 NAT16Q8N8M0 369 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 OR6K2Q8NGY2 324 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 IL31RAQ8NI17 732 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 ZNF671Q8TAW3 534 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 MAGEC3Q8TD91 643 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 TRAPPC9Q96Q05 1148 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 COPG2Q9UBF2 871 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 SNX6Q9UNH7 406 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 CENPXA8MT69 81 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 PAPSS1O43252 624 aaPredicted RBP12.21□□□□□ -0.46
COL8A1-201ENST00000261037 IFNGR2P38484 337 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 CYP4F2P78329 520 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 CYP4F3Q08477 520 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 FAM187BQ17R55 369 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 XKR6Q5GH73 641 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 CDC73Q6P1J9 531 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 TMC5Q6UXY8 1006 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 CERS2Q96G23 380 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 UROC1Q96N76 676 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 KCNMB3Q9NPA1 279 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 ASAH2Q9NR71 780 aa12.21□□□□□ -0.46
COL8A1-201ENST00000261037 EPHB6O15197 1021 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 TNFAIP8O95379 198 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 IL1BP01584 269 aa12.2□□□□□ -0.46
COL8A1-201ENST00000261037 IDH2P48735 452 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms