RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 CCDC134Q9H6E4 229 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 SSU72Q9NP77 194 aaKnown RBP22.66■■□□□ 1.22
SIX3-201ENST00000260653 DNMT3BQ9UBC3 853 aaKnown RBP22.66■■□□□ 1.22
SIX3-201ENST00000260653 PER2O15055 1255 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 CLASP2O75122 1294 aaKnown RBP22.66■■□□□ 1.22
SIX3-201ENST00000260653 KRT38O76015 456 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 RB1P06400 928 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 PCID2Q5JVF3 399 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 SH2D5Q6ZV89 423 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 HTR3DQ70Z44 454 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 WFDC5Q8TCV5 224 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 ZNF317Q96PQ6 595 aaPredicted RBP22.66■■□□□ 1.22
SIX3-201ENST00000260653 CCL26Q9Y258 94 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 BPTFQ12830 3046 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 LEFTY2O00292 366 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 FAM107AO95990 144 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 PYGBP11216 843 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 GPR158Q5T848 1215 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 LGSNQ5TDP6 509 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 PACS1Q6VY07 963 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 SGSM3Q96HU1 749 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 NOTCH4Q99466 2003 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 TYW5A2RUC4 315 aaKnown RBP22.65■■□□□ 1.22
SIX3-201ENST00000260653 MZF1P28698 734 aaPredicted RBP22.65■■□□□ 1.22
SIX3-201ENST00000260653 SLC18A1P54219 525 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 EPHA5P54756 1037 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 SHHQ15465 462 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 SLC1A5Q15758 541 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 SLC5A9Q2M3M2 681 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 ZNF697Q5TEC3 545 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 CHMP6Q96FZ7 201 aa22.65■■□□□ 1.22
SIX3-201ENST00000260653 PAIP2Q9BPZ3 127 aaKnown RBP22.65■■□□□ 1.22
SIX3-201ENST00000260653 C12orf65Q9H3J6 166 aaKnown RBP22.65■■□□□ 1.22
SIX3-201ENST00000260653 HELZP42694 1942 aaKnown RBP22.65■■□□□ 1.22
SIX3-201ENST00000260653 MOSPD3O75425 235 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 LUC7L3O95232 432 aaKnown RBP22.64■■□□□ 1.22
SIX3-201ENST00000260653 RHOP08100 348 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 F7P08709 466 aaPredicted RBP22.64■■□□□ 1.22
SIX3-201ENST00000260653 SERPINB9P50453 376 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 SLC20A2Q08357 652 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 NAB1Q13506 487 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 FRG1Q14331 258 aaKnown RBP22.64■■□□□ 1.22
SIX3-201ENST00000260653 TEAD2Q15562 447 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 HSP90AA5PQ58FG0 334 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 PKN3Q6P5Z2 889 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 ZNF449Q6P9G9 518 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 POTEHQ6S545 545 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 TDRD5Q8NAT2 981 aaKnown RBP22.64■■□□□ 1.22
SIX3-201ENST00000260653 AGAP2Q99490 1192 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 CINPQ9BW66 212 aaPredicted RBP22.64■■□□□ 1.22
SIX3-201ENST00000260653 ARNT2Q9HBZ2 717 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 SEPT3Q9UH03 358 aa22.64■■□□□ 1.22
SIX3-201ENST00000260653 SNAP91O60641 907 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 ASMTLO95671 621 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 PTPN2P17706 415 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 RGRP47804 291 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 CDH18Q13634 790 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 KCNMB4Q86W47 210 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 PPHLN1Q8NEY8 458 aaKnown RBP22.64■■□□□ 1.21
SIX3-201ENST00000260653 ZNF473Q8WTR7 871 aaKnown RBP22.64■■□□□ 1.21
SIX3-201ENST00000260653 CKAP2Q8WWK9 683 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 ALKBH8Q96BT7 664 aaKnown RBP22.64■■□□□ 1.21
SIX3-201ENST00000260653 EXOC2Q96KP1 924 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 PSKH2Q96QS6 385 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 MGME1Q9BQP7 344 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 C20orf96Q9NUD7 363 aaPredicted RBP22.64■■□□□ 1.21
SIX3-201ENST00000260653 PLK2Q9NYY3 685 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 TCAF1Q9Y4C2 921 aa22.64■■□□□ 1.21
SIX3-201ENST00000260653 GOLGA8TH3BQL2 631 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 RFPL1O75677 317 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 NTHL1P78549 312 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 ARF5P84085 180 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 ALG1LQ6GMV1 187 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 LINGO4Q6UY18 593 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 RBM23Q86U06 439 aaKnown RBP22.63■■□□□ 1.21
SIX3-201ENST00000260653 CCDC117Q8IWD4 279 aaPredicted RBP22.63■■□□□ 1.21
SIX3-201ENST00000260653 BBS5Q8N3I7 341 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 TCP10LQ8TDR4 215 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 DDI1Q8WTU0 396 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 MTBPQ96DY7 904 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 TGS1Q96RS0 853 aaKnown RBP22.63■■□□□ 1.21
SIX3-201ENST00000260653 CERS4Q9HA82 394 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 GRID1Q9ULK0 1009 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 SLC18A2Q05940 514 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 SEPT6Q14141 434 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 QPCTQ16769 361 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 ARHGAP26Q9UNA1 814 aa22.63■■□□□ 1.21
SIX3-201ENST00000260653 AVPR1AP37288 418 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 CCT5P48643 541 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 TEDDM1Q5T9Z0 273 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 TPGS1Q6ZTW0 290 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 RTL10Q7L3V2 364 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 RNF135Q8IUD6 432 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 LRRC34Q8IZ02 419 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 CMTM8Q8IZV2 173 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 RIN3Q8TB24 985 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 SH3RF2Q8TEC5 729 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 ATP2A3Q93084 1043 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 APOPT1Q96IL0 206 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 FEM1AQ9BSK4 669 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms