RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 OR8D1Q8WZ84 308 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 FAM131CQ96AQ9 280 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 TADA1Q96BN2 335 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 TUBGCP5Q96RT8 1024 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 HEPHQ9BQS7 1158 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 TNKS2Q9H2K2 1166 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 MTG2Q9H4K7 406 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 SMARCAL1Q9NZC9 954 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 EBF1Q9UH73 591 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 CDC23Q9UJX2 597 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 PPM1HQ9ULR3 514 aa14.31□□□□□ -0.12
VPS25-201ENST00000253794 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
VPS25-201ENST00000253794 CCDC163A0A0D9SF12 145 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 GOLGA6L10A0A0M3HER8 536 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 CCDC188H7C350 402 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 K7ESF4 209 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 RNF103O00237 685 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 KCNN4O15554 427 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 OPHN1O60890 802 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 PHF2O75151 1096 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 GCATO75600 419 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 STK10O94804 968 aaKnown RBP14.3□□□□□ -0.12
VPS25-201ENST00000253794 CTSLP07711 333 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 CD68P34810 354 aaPredicted RBP14.3□□□□□ -0.12
VPS25-201ENST00000253794 PAFAH1B1P43034 410 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 RECQLP46063 649 aaPredicted RBP14.3□□□□□ -0.12
VPS25-201ENST00000253794 SATB1Q01826 763 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 P3H1Q32P28 736 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 TMEM31Q5JXX7 168 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 DSG4Q86SJ6 1040 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 SRLQ86TD4 932 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 KLHDC8BQ8IXV7 354 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 ZNF567Q8N184 647 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 STK40Q8N2I9 435 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 DTWD2Q8NBA8 298 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 ARRDC2Q8TBH0 407 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 HCAR2Q8TDS4 363 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 SLCO2A1Q92959 643 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 SPATA13Q96N96 652 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 TMEM121Q9BTD3 319 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 AP1M1Q9BXS5 423 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 OSBPL1AQ9BXW6 950 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 TM6SF2Q9BZW4 377 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 MKRN2Q9H000 416 aaKnown RBP14.3□□□□□ -0.12
VPS25-201ENST00000253794 SLC25A51Q9H1U9 297 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 NT5MQ9NPB1 228 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 FBXO4Q9UKT5 387 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 SCML1Q9UN30 329 aa14.3□□□□□ -0.12
VPS25-201ENST00000253794 KMT2EQ8IZD2 1858 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.29□□□□□ -0.12
VPS25-201ENST00000253794 TCRBV21S2A2A0A5A6 115 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 INSIG1O15503 277 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 ALDH1A2O94788 518 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 APBB3O95704 486 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 PRNPP04156 253 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 GABRG2P18507 467 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 CHRNA3P32297 505 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 RPS14P62263 151 aaKnown RBP14.29□□□□□ -0.12
VPS25-201ENST00000253794 LMNB2Q03252 620 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 RAD51Q06609 339 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 WHAMMP3Q1A5X7 153 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 ATXN7L2Q5T6C5 722 aaPredicted RBP14.29□□□□□ -0.12
VPS25-201ENST00000253794 ZNF776Q68DI1 518 aaPredicted RBP14.29□□□□□ -0.12
VPS25-201ENST00000253794 TTC27Q6P3X3 843 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 NCEH1Q6PIU2 408 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 B4GALNT4Q76KP1 1039 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 C1orf210Q8IVY1 113 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 MAML2Q8IZL2 1156 aaPredicted RBP14.29□□□□□ -0.12
VPS25-201ENST00000253794 FAM71DQ8N9W8 422 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 CHST14Q8NCH0 376 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 TSTD1Q8NFU3 115 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 ATL2Q8NHH9 583 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 IMP4Q96G21 291 aaKnown RBP14.29□□□□□ -0.12
VPS25-201ENST00000253794 CAPZA3Q96KX2 299 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 MRGPRX1Q96LB2 322 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 GBA3Q9H227 469 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 C10orf88Q9H8K7 445 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 GLOD4Q9HC38 313 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 POLR3BQ9NW08 1133 aaPredicted RBP14.29□□□□□ -0.12
VPS25-201ENST00000253794 IL36AQ9UHA7 158 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 ZNF148Q9UQR1 794 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 MRFAP1Q9Y605 127 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 SHROOM3Q8TF72 1996 aa14.29□□□□□ -0.12
VPS25-201ENST00000253794 TSPAN11A1L157 253 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 FAM86C2PA6NEL3 165 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 TRAFD1O14545 582 aaPredicted RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 ZBTB24O43167 697 aaPredicted RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 RNASEH1O60930 286 aaKnown RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 SOCS5O75159 536 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 ADH1BP00325 375 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 IGLV3-19P01714 112 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 MMP2P08253 660 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 NDUFV2P19404 249 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 COILP38432 576 aaPredicted RBP14.28□□□□□ -0.12
VPS25-201ENST00000253794 GDF10P55107 478 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 NIPAL4Q0D2K0 466 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 CST6Q15828 149 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 ANKRD20A2Q5SQ80 823 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 ANKRD20A1Q5TYW2 823 aa14.28□□□□□ -0.12
VPS25-201ENST00000253794 ANKRD20A3Q5VUR7 823 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms