RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 DNAJB5O75953 348 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 METTL18O95568 372 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ALDOAP04075 364 aaKnown RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 UMPSP11172 480 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 IDO1P14902 403 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CYP2F1P24903 491 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ADORA2AP29274 412 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CAP1Q01518 475 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 SLC6A3Q01959 620 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 USP10Q14694 798 aaKnown RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 PPP2R5DQ14738 602 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 OGFRL1Q5TC84 451 aaPredicted RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ANKRD13AQ8IZ07 590 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF555Q8NEP9 628 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 PYDC1Q8WXC3 89 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 TCF12Q99081 682 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 HOPXQ9BPY8 73 aaPredicted RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 TMEM79Q9BSE2 394 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 HTATIP2Q9BUP3 242 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CAAP1Q9H8G2 361 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 NMRAL1Q9HBL8 299 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 VTA1Q9NP79 307 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 C20orf96Q9NUD7 363 aaPredicted RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 GTSE1Q9NYZ3 720 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ACOT9Q9Y305 439 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 RPS6KL1Q9Y6S9 549 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 NPHS1O60500 1241 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 STAG3L1P0CL83 205 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 GFAPP14136 432 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 SMPD1P17405 629 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 PIK3R1P27986 724 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CDC25CP30307 473 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CYP2C18P33260 490 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CDK9P50750 372 aaKnown RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 GEMP55040 296 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CDH8P55286 799 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 HPCAP84074 193 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ITGA7Q13683 1181 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 GRM2Q14416 872 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CDO1Q16878 200 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 LRRC36Q1X8D7 754 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 KCTD21Q4G0X4 260 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CYP4A22Q5TCH4 519 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 TAF2Q6P1X5 1199 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 C16orf46Q6P387 395 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CYHR1Q6ZMK1 362 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CCDC80Q76M96 950 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 SNX32Q86XE0 403 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 TICAM1Q8IUC6 712 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 FAM9CQ8IZT9 166 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF669Q96BR6 464 aaPredicted RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CERS2Q96G23 380 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 HSFY1Q96LI6 401 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 PANX3Q96QZ0 392 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 RHOBTB2Q9BYZ6 727 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 IL22Q9GZX6 179 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 SUCOQ9UBS9 1254 aaKnown RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 DOLKQ9UPQ8 538 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ZCWPW2A0A1B0GU75 182 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 MEI4A8MW99 385 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 AKAP10O43572 662 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 TBC1D4O60343 1298 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ALBP02768 609 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 MMP3P08254 477 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CSH1P0DML2 217 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CSH2P0DML3 217 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ATP6V1B1P15313 513 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 AMPD1P23109 780 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CTGFP29279 349 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 GLUD2P49448 558 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ARHGDIAP52565 204 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 MTTPP55157 894 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 NME5P56597 212 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 C21orf59P57076 290 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 SESN2P58004 480 aaPredicted RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 SLC25A3Q00325 362 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 MMRN1Q13201 1228 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 SMTNL2Q2TAL5 461 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 TMTC4Q5T4D3 741 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 UNC5AQ6ZN44 842 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 BEND5Q7L4P6 421 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 STRADAQ7RTN6 431 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF410Q86VK4 478 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 DHFR2Q86XF0 187 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 FATE1Q969F0 183 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 HDAC11Q96DB2 347 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 CDCA5Q96FF9 252 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 COX4I2Q96KJ9 171 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 GPR78Q96P69 363 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 PRPF18Q99633 342 aaKnown RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 WDR12Q9GZL7 423 aaKnown RBP4.2□□□□□ -1.74
UBE4A-201ENST00000252108 EBF3Q9H4W6 596 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 HMG20AQ9NP66 347 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 FLRT1Q9NZU1 646 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 AP4E1Q9UPM8 1137 aa4.2□□□□□ -1.74
UBE4A-201ENST00000252108 A0A096LPK6 155 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DCXO43602 365 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF23P17027 643 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 HTR7P34969 479 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms