RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PAFAH1B3Q15102 231 aaKnown RBP19.19■□□□□ 0.66
SNX4-201ENST00000251775 MORN1Q5T089 497 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 SPRYD7Q5W111 196 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 CES3Q6UWW8 571 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 SIX6OS1Q8N1H7 587 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 ISL2Q96A47 359 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 PPP1R10Q96QC0 940 aaKnown RBP19.19■□□□□ 0.66
SNX4-201ENST00000251775 GATA5Q9BWX5 397 aaPredicted RBP19.19■□□□□ 0.66
SNX4-201ENST00000251775 ZNF385DQ9H6B1 395 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 CRTAC1Q9NQ79 661 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 I6L893 689 aaPredicted RBP19.19■□□□□ 0.66
SNX4-201ENST00000251775 EEF2KO00418 725 aaKnown RBP19.19■□□□□ 0.66
SNX4-201ENST00000251775 DCLK1O15075 740 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 LTFP02788 710 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 MLH1P40692 756 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 MAP2K5Q13163 448 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 OLIG2Q13516 323 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 CCL14Q16627 93 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 LPCAT2Q7L5N7 544 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 CPSF7Q8N684 471 aaKnown RBP19.19■□□□□ 0.66
SNX4-201ENST00000251775 SYBUQ9NX95 663 aa19.19■□□□□ 0.66
SNX4-201ENST00000251775 TRIM13O60858 407 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 H6PDO95479 791 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 GARSP41250 739 aaKnown RBP19.18■□□□□ 0.66
SNX4-201ENST00000251775 STT3AP46977 705 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 IRF9Q00978 393 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 IL23RQ5VWK5 629 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 DHRS4L2Q6PKH6 230 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 FAM156AQ8NDB6 213 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 EME1Q96AY2 570 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 ATXN7L3BQ96GX2 97 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 ZNF597Q96LX8 424 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 BIRC8Q96P09 236 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 PGLYRP2Q96PD5 576 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 ULBP1Q9BZM6 244 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 ACSS2Q9NR19 701 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 FAIMQ9NVQ4 179 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 KCNK1O00180 336 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 F7P08709 466 aaPredicted RBP19.18■□□□□ 0.66
SNX4-201ENST00000251775 NELFEP18615 380 aaKnown RBP19.18■□□□□ 0.66
SNX4-201ENST00000251775 PPARGP37231 505 aaPredicted RBP19.18■□□□□ 0.66
SNX4-201ENST00000251775 GRTP1Q5TC63 336 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 CTU1Q7Z7A3 348 aaKnown RBP19.18■□□□□ 0.66
SNX4-201ENST00000251775 CARM1Q86X55 608 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 SLC7A14Q8TBB6 771 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 CPNE1Q99829 537 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 ILKAPQ9H0C8 392 aaPredicted RBP19.18■□□□□ 0.66
SNX4-201ENST00000251775 COQ10BQ9H8M1 238 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 TDRKHQ9Y2W6 561 aaKnown RBP19.18■□□□□ 0.66
SNX4-201ENST00000251775 NUP205Q92621 2012 aa19.18■□□□□ 0.66
SNX4-201ENST00000251775 C17orf102A2RUQ5 167 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 IQCA1LA6NCM1 817 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 YJEFN3A6XGL0 299 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 HDAC3O15379 428 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 ADRA1BP35368 520 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 AFF1P51825 1210 aaKnown RBP19.17■□□□□ 0.66
SNX4-201ENST00000251775 TMEM198Q66K66 360 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 GPRIN1Q7Z2K8 1008 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 PID1Q7Z2X4 250 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 SETD3Q86TU7 594 aaPredicted RBP19.17■□□□□ 0.66
SNX4-201ENST00000251775 ATP6V1E2Q96A05 226 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 CERS2Q96G23 380 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 TMEM30AQ9NV96 361 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 ARHGEF37A1IGU5 675 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 H3BNH8 94 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 SLC22A2O15244 555 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 ERCC2P18074 760 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 TCN1P20061 433 aaPredicted RBP19.17■□□□□ 0.66
SNX4-201ENST00000251775 CCR10P46092 362 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 CLEC14AQ86T13 490 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 SENP8Q96LD8 212 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 RANBP9Q96S59 729 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 RBBP8Q99708 897 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 SMOQ99835 787 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 TSPYL2Q9H2G4 693 aaPredicted RBP19.17■□□□□ 0.66
SNX4-201ENST00000251775 WDR6Q9NNW5 1121 aaKnown RBP19.17■□□□□ 0.66
SNX4-201ENST00000251775 TBCCD1Q9NVR7 557 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 ARHGEF38Q9NXL2 777 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 FAF1Q9UNN5 650 aaPredicted RBP19.17■□□□□ 0.66
SNX4-201ENST00000251775 SH3GLB1Q9Y371 365 aa19.17■□□□□ 0.66
SNX4-201ENST00000251775 TIMM13Q9Y5L4 95 aaPredicted RBP19.17■□□□□ 0.66
SNX4-201ENST00000251775 SHROOM3Q8TF72 1996 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 H0YJX3 145 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 GRID2O43424 1007 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 NDST2P52849 883 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 IFRD2Q12894 506 aaPredicted RBP19.16■□□□□ 0.66
SNX4-201ENST00000251775 IKBKEQ14164 716 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 RFTN1Q14699 578 aaPredicted RBP19.16■□□□□ 0.66
SNX4-201ENST00000251775 DLG2Q15700 870 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 SEL1L3Q68CR1 1132 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 Q6ZNX1 250 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 SMYD1Q8NB12 490 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 ZMIZ2Q8NF64 920 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 ZSCAN18Q8TBC5 510 aaPredicted RBP19.16■□□□□ 0.66
SNX4-201ENST00000251775 FCRL3Q96P31 734 aaPredicted RBP19.16■□□□□ 0.66
SNX4-201ENST00000251775 NUF2Q9BZD4 464 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 SEMA6AQ9H2E6 1030 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 RRN3Q9NYV6 651 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 IGSF9Q9P2J2 1179 aa19.16■□□□□ 0.66
SNX4-201ENST00000251775 ZNHIT2Q9UHR6 403 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms