RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 GRM3Q14832 879 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 CYTH1Q15438 398 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 FUT11Q495W5 492 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 NAPEPLDQ6IQ20 393 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 PTCRAQ6ISU1 281 aaPredicted RBP13.13□□□□□ -0.31
LSM8-201ENST00000249299 PRUNE1Q86TP1 453 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 PDIK1LQ8N165 341 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 MREGQ8N565 214 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 PCDH20Q8N6Y1 951 aaKnown RBP13.13□□□□□ -0.31
LSM8-201ENST00000249299 CSGALNACT1Q8TDX6 532 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 LRRN4Q8WUT4 740 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 ZNF419Q96HQ0 510 aaPredicted RBP13.13□□□□□ -0.31
LSM8-201ENST00000249299 ZFYVE19Q96K21 471 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 NUDCD1Q96RS6 583 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 KCNK12Q9HB15 430 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 ARNT2Q9HBZ2 717 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 KIF26AQ9ULI4 1882 aaPredicted RBP13.13□□□□□ -0.31
LSM8-201ENST00000249299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.13□□□□□ -0.31
LSM8-201ENST00000249299 OTOL1A6NHN0 477 aaPredicted RBP13.13□□□□□ -0.31
LSM8-201ENST00000249299 E7ESA3 106 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 SNAP91O60641 907 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 SERPINF2P08697 491 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 TSHRP16473 764 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 MAGEA3P43357 314 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 NRLP54845 237 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 TRADDQ15628 312 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 HIF1AQ16665 826 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
LSM8-201ENST00000249299 MBLAC2Q68D91 279 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 LRRC8BQ6P9F7 803 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 CENPUQ71F23 418 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 RALGPS2Q86X27 583 aaPredicted RBP13.13□□□□□ -0.31
LSM8-201ENST00000249299 CCNJLQ8IV13 435 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 SLC44A3Q8N4M1 653 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 SH2D3CQ8N5H7 860 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 TERB1Q8NA31 727 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 ARRDC2Q8TBH0 407 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 UCMAQ8WVF2 138 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 NAT9Q9BTE0 207 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 SLC2A4RGQ9NR83 387 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 ELOVL2Q9NXB9 296 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 PLA2G4CQ9UP65 541 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 STARD13Q9Y3M8 1113 aa13.13□□□□□ -0.31
LSM8-201ENST00000249299 A0A1W2PQ67 120 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 LOC730098B7Z3J9 87 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 ALOX15BO15296 676 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 INSIG1O15503 277 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 GSRP00390 522 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 MYBL2P10244 700 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 GLDCP23378 1020 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 OPRD1P41143 372 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 TNFRSF4P43489 277 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 LMAN1P49257 510 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 RHOAP61586 193 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 SNRPD1P62314 119 aaKnown RBP13.12□□□□□ -0.31
LSM8-201ENST00000249299 BEND6Q5SZJ8 279 aaPredicted RBP13.12□□□□□ -0.31
LSM8-201ENST00000249299 TRMT10CQ7L0Y3 403 aaKnown RBP13.12□□□□□ -0.31
LSM8-201ENST00000249299 PRPF39Q86UA1 669 aaKnown RBP13.12□□□□□ -0.31
LSM8-201ENST00000249299 PHTF2Q8N3S3 785 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 PGBD5Q8N414 524 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 NAT16Q8N8M0 369 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 ZNF454Q8N9F8 522 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 ATP11CQ8NB49 1132 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 TSEN2Q8NCE0 465 aaKnown RBP13.12□□□□□ -0.31
LSM8-201ENST00000249299 GDAP1L1Q96MZ0 367 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 TUBGCP5Q96RT8 1024 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
LSM8-201ENST00000249299 CEP41Q9BYV8 373 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 TXLNGYQ9BZA5 131 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 GTSE1Q9NYZ3 720 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 ERVW-1Q9UQF0 538 aa13.12□□□□□ -0.31
LSM8-201ENST00000249299 NUP205Q92621 2012 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 LOC285095A0A1B0GVY8 99 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 MAGEB16A2A368 324 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 WASH3PC4AMC7 463 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 SOCS5O75159 536 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 TMEM63AO94886 807 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 IGSF6O95976 241 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 APODP05090 189 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 SRCP12931 536 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 ADRA1AP35348 466 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 TNNT3P45378 269 aaPredicted RBP13.11□□□□□ -0.31
LSM8-201ENST00000249299 NPY2RP49146 381 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 RPL26P61254 145 aaKnown RBP13.11□□□□□ -0.31
LSM8-201ENST00000249299 ST8SIA6P61647 398 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 SKOR1P84550 965 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 RAD51Q06609 339 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 ITKQ08881 620 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 GEN1Q17RS7 908 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 ANKRD22Q5VYY1 191 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 TMEM215Q68D42 235 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 KDELC1Q6UW63 502 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 RANBP10Q6VN20 620 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 TMC3Q7Z5M5 1100 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 CNPY4Q8N129 248 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 OR2AP1Q8NGE2 309 aa13.11□□□□□ -0.31
LSM8-201ENST00000249299 MAFAQ8NHW3 353 aaPredicted RBP13.11□□□□□ -0.31
LSM8-201ENST00000249299 USP33Q8TEY7 942 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms