RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SP110Q9HB58 689 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 TM9SF3Q9HD45 589 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 LUC7LQ9NQ29 371 aaKnown RBP12.98□□□□□ -0.33
VPREB3-201ENST00000248948 DNAAF2Q9NVR5 837 aaKnown RBP12.98□□□□□ -0.33
VPREB3-201ENST00000248948 LHX3Q9UBR4 397 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 DMTF1Q9Y222 760 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 MFHAS1Q9Y4C4 1052 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 ACTL7AQ9Y615 435 aa12.98□□□□□ -0.33
VPREB3-201ENST00000248948 C4orf47A7E2U8 309 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 UPK3BL1B0FP48 263 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 UPK3BL2E5RIL1 263 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 TM4SF5O14894 197 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 CER1O95813 267 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 ADRB3P13945 408 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 CYLC1P35663 651 aaPredicted RBP12.97□□□□□ -0.33
VPREB3-201ENST00000248948 SSR1P43307 286 aaKnown RBP12.97□□□□□ -0.33
VPREB3-201ENST00000248948 PAPOLAP51003 745 aaKnown RBP12.97□□□□□ -0.33
VPREB3-201ENST00000248948 DNA2P51530 1060 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 ARSEP51690 589 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 CDH6P55285 790 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 TAS2R38P59533 333 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 PPP2CBP62714 309 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 PPP2CAP67775 309 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 RAD51Q06609 339 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 GRM3Q14832 879 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 PDK2Q15119 407 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 SETMARQ53H47 684 aaPredicted RBP12.97□□□□□ -0.33
VPREB3-201ENST00000248948 ZNF805Q5CZA5 627 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 TXNRD3NBQ6F5E7 133 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 NAPEPLDQ6IQ20 393 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 PARS2Q7L3T8 475 aaKnown RBP12.97□□□□□ -0.33
VPREB3-201ENST00000248948 RYBPQ8N488 228 aaPredicted RBP12.97□□□□□ -0.33
VPREB3-201ENST00000248948 SLC35G2Q8TBE7 412 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 RAB7BQ96AH8 199 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 ZNF599Q96NL3 588 aa12.97□□□□□ -0.33
VPREB3-201ENST00000248948 GTPBP2Q9BX10 602 aaKnown RBP12.97□□□□□ -0.33
VPREB3-201ENST00000248948 COL5A1P20908 1838 aaPredicted RBP12.97□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3DA0A087WVF3 549 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3IA0A087WXS9 549 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3EA0A087X179 549 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3KA0A087X1G2 549 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3FA6NER0 549 aaPredicted RBP12.96□□□□□ -0.33
VPREB3-201ENST00000248948 ZNF487B1APH4 448 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3LB9A6J9 549 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 DFFAO00273 331 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 PLK4O00444 970 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 KRIT1O00522 736 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 VILLO15195 856 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 AP1G1O43747 822 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 OPHN1O60890 802 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 POP4O95707 220 aaKnown RBP12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3HP0C7X1 549 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 ZNF883P0CG24 379 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 CDC25BP30305 580 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 HADHBP55084 474 aaKnown RBP12.96□□□□□ -0.33
VPREB3-201ENST00000248948 SLC14A1Q13336 389 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 DPYSL3Q14195 570 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TMCO4Q5TGY1 634 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3GQ6DHY5 549 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3CQ6IPX1 549 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 KIAA1161Q6NSJ0 714 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 LEKR1Q6ZMV7 388 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 VSIG1Q86XK7 387 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TBC1D3Q8IZP1 549 aaPredicted RBP12.96□□□□□ -0.33
VPREB3-201ENST00000248948 OR6K2Q8NGY2 324 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 VOPP1Q96AW1 172 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 SKA1Q96BD8 255 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 FAF2Q96CS3 445 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 SLC6A18Q96N87 628 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TUBGCP5Q96RT8 1024 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 CINPQ9BW66 212 aaPredicted RBP12.96□□□□□ -0.33
VPREB3-201ENST00000248948 FSCN3Q9NQT6 498 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 SLCO1B1Q9Y6L6 691 aa12.96□□□□□ -0.33
VPREB3-201ENST00000248948 TSPAN11A1L157 253 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 J3KR12 359 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 RNF103O00237 685 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
VPREB3-201ENST00000248948 GJB3O75712 270 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
VPREB3-201ENST00000248948 UGT2B4P06133 528 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 CSRP1P21291 193 aaKnown RBP12.95□□□□□ -0.34
VPREB3-201ENST00000248948 GJC1P36383 396 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
VPREB3-201ENST00000248948 SLC1A1P43005 524 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 CSNK1DP48730 415 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 SUOXP51687 545 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 TAS2R40P59535 323 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 MESDQ14696 234 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 CYTH1Q15438 398 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 MYLK3Q32MK0 819 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 SLC45A4Q5BKX6 768 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 ATXN7L2Q5T6C5 722 aaPredicted RBP12.95□□□□□ -0.34
VPREB3-201ENST00000248948 LRRC38Q5VT99 294 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 FBXL19Q6PCT2 694 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 GDPD4Q6W3E5 623 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 ADAT2Q7Z6V5 191 aaKnown RBP12.95□□□□□ -0.34
VPREB3-201ENST00000248948 PRPF39Q86UA1 669 aaKnown RBP12.95□□□□□ -0.34
VPREB3-201ENST00000248948 IQCHQ86VS3 1027 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 HORMAD1Q86X24 394 aa12.95□□□□□ -0.34
VPREB3-201ENST00000248948 LRRC49Q8IUZ0 686 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms