RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 GLOD4Q9HC38 313 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 RBM22Q9NW64 420 aaKnown RBP eCLIP25.88■■□□□ 1.73
RAB40C-201ENST00000248139 PTCH2Q9Y6C5 1203 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 TLL2Q9Y6L7 1015 aa25.88■■□□□ 1.73
RAB40C-201ENST00000248139 CAPN8A6NHC0 703 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 ARCN1P48444 511 aaKnown RBP25.87■■□□□ 1.73
RAB40C-201ENST00000248139 CSRP3P50461 194 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 MRPS22P82650 360 aaKnown RBP25.87■■□□□ 1.73
RAB40C-201ENST00000248139 SPRYD7Q5W111 196 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 IL31Q6EBC2 164 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 CNSTQ6PJW8 725 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 KBTBD6Q86V97 674 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 FCRL2Q96LA5 508 aaPredicted RBP25.87■■□□□ 1.73
RAB40C-201ENST00000248139 GPR78Q96P69 363 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 SYT17Q9BSW7 474 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 BRD8Q9H0E9 1235 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 MYLKQ15746 1914 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 TARM1B6A8C7 271 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 LDB1Q86U70 411 aaPredicted RBP25.87■■□□□ 1.73
RAB40C-201ENST00000248139 PPP2R3CQ969Q6 453 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 NPAS2Q99743 824 aa25.87■■□□□ 1.73
RAB40C-201ENST00000248139 CABYRO75952 493 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 MAXP61244 160 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 MS4A2Q01362 244 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 GDF6Q6KF10 455 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-201ENST00000248139 SDCCAG8Q86SQ7 713 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-201ENST00000248139 CSNK1G1Q9HCP0 422 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 RGSL1A5PLK6 1076 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 KCNA5P22460 613 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 RAB10P61026 200 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 TXNDC5Q8NBS9 432 aaKnown RBP25.86■■□□□ 1.73
RAB40C-201ENST00000248139 HEXDCQ8WVB3 486 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 NR1H4Q96RI1 486 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-201ENST00000248139 TNFRSF12AQ9NP84 129 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 AK5Q9Y6K8 562 aa25.86■■□□□ 1.73
RAB40C-201ENST00000248139 MGEA5O60502 916 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 THRAP10827 490 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 STMN1P16949 149 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 PCSK1P29120 753 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 CYLC2Q14093 348 aaPredicted RBP25.85■■□□□ 1.73
RAB40C-201ENST00000248139 CSHL1Q14406 222 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 GSTA3Q16772 222 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 SH2D4BQ5SQS7 431 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 GBP5Q96PP8 586 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 FSD1LQ9BXM9 530 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 M0QZ92 97 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 MT-CO1P00395 513 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 FRG1Q14331 258 aaKnown RBP25.85■■□□□ 1.73
RAB40C-201ENST00000248139 GNASQ5JWF2 1037 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 METTL21CQ5VZV1 264 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 FBXL19Q6PCT2 694 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 ADGRG6Q86SQ4 1221 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 LINC00523Q86TU6 105 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 KYQ8NBH2 561 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 TMA16Q96EY4 203 aaKnown RBP25.85■■□□□ 1.73
RAB40C-201ENST00000248139 TSPAN18Q96SJ8 248 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 PAPOLBQ9NRJ5 636 aaKnown RBP25.85■■□□□ 1.73
RAB40C-201ENST00000248139 GTSE1Q9NYZ3 720 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 PCDHGB4Q9UN71 923 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 AAR2Q9Y312 384 aaKnown RBP25.85■■□□□ 1.73
RAB40C-201ENST00000248139 PCDHGB5Q9Y5G0 923 aa25.85■■□□□ 1.73
RAB40C-201ENST00000248139 CEACAM7Q14002 265 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 TFAP2DQ7Z6R9 452 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 CDYLQ9Y232 598 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 VCLP18206 1134 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 TSPAN8P19075 237 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 HDCP19113 662 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 CD52P31358 61 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 PRKAA1Q13131 559 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 ACAD11Q709F0 780 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 NMUR1Q9HB89 426 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 SPON1Q9HCB6 807 aa25.84■■□□□ 1.73
RAB40C-201ENST00000248139 DMAP1Q9NPF5 467 aaPredicted RBP25.84■■□□□ 1.73
RAB40C-201ENST00000248139 COPG1Q9Y678 874 aaKnown RBP25.84■■□□□ 1.73
RAB40C-201ENST00000248139 IRAK2O43187 625 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 CCNCP24863 283 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 NSUN2Q08J23 767 aaKnown RBP eCLIP25.83■■□□□ 1.73
RAB40C-201ENST00000248139 PPHLN1Q8NEY8 458 aaKnown RBP25.83■■□□□ 1.73
RAB40C-201ENST00000248139 JADE3Q92613 823 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 MRGPRX2Q96LB1 330 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 KLHL5Q96PQ7 755 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 POMKQ9H5K3 350 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 GLTPD2A6NH11 291 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 PPARGP37231 505 aaPredicted RBP25.83■■□□□ 1.73
RAB40C-201ENST00000248139 PAPOLAP51003 745 aaKnown RBP25.83■■□□□ 1.73
RAB40C-201ENST00000248139 MED21Q13503 144 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 MMEL1Q495T6 779 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 KDM1BQ8NB78 822 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 SH3RF2Q8TEC5 729 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 FCRL5Q96RD9 977 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 OSBPL2Q9H1P3 480 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 ANKRD6Q9Y2G4 727 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 TCAF1Q9Y4C2 921 aa25.83■■□□□ 1.73
RAB40C-201ENST00000248139 PRDX6P30041 224 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 SLC5A3P53794 718 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 BTBD8Q5XKL5 378 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 CD300LGQ6UXG3 332 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 OLFM1Q99784 485 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 RRN3Q9NYV6 651 aa25.82■■□□□ 1.72
RAB40C-201ENST00000248139 TRPV2Q9Y5S1 764 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms