RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 VAPBO95292 243 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 THRAP10827 490 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 CYBAP13498 195 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 TFEBP19484 476 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 CCNCP24863 283 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 PCSK1P29120 753 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 AQP4P55087 323 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 PRKAA1Q13131 559 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 MSLNQ13421 630 aaPredicted RBP14.58□□□□□ -0.08
HIF3A-202ENST00000244303 ESRP1Q6NXG1 681 aaKnown RBP14.58□□□□□ -0.08
HIF3A-202ENST00000244303 KBTBD6Q86V97 674 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 NLRC5Q86WI3 1866 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 CEP97Q8IW35 865 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 MFSD6LQ8IWD5 586 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 ARHGAP12Q8IWW6 846 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 ATPAF2Q8N5M1 289 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 PATJQ8NI35 1801 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 IRGQQ8WZA9 623 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 UNKQ9C0B0 810 aaKnown RBP14.58□□□□□ -0.08
HIF3A-202ENST00000244303 SENP6Q9GZR1 1112 aaPredicted RBP14.58□□□□□ -0.08
HIF3A-202ENST00000244303 XPR1Q9UBH6 696 aa14.58□□□□□ -0.08
HIF3A-202ENST00000244303 RGSL1A5PLK6 1076 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 TARM1B6A8C7 271 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 JUNP05412 331 aaKnown RBP14.57□□□□□ -0.08
HIF3A-202ENST00000244303 ZNF33AQ06730 810 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 TRIP10Q15642 601 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 DENND5AQ6IQ26 1287 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 CNTN4Q8IWV2 1026 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 LSMEM2Q8N112 164 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 SPATA6LQ8N4H0 392 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 TRIB2Q92519 343 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 FCRL5Q96RD9 977 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 FICDQ9BVA6 458 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 OSBPL2Q9H1P3 480 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 VCX3BQ9H321 246 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 ACOT9Q9Y305 439 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 MYO16Q9Y6X6 1858 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 TTC3P53804 2025 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 FAM95CA0A1B0GW59 222 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 DLX3O60479 287 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 ARNTP27540 789 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 HK2P52789 917 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 PRKAA2P54646 552 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 RAB10P61026 200 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 DLG1Q12959 904 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 UPP1Q16831 310 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 UGP2Q16851 508 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 MFSD14CQ5VZR4 134 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 TMEM198Q66K66 360 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 AGMOQ6ZNB7 445 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 ACAD11Q709F0 780 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 SERINC5Q86VE9 423 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 PPHLN1Q8NEY8 458 aaKnown RBP14.57□□□□□ -0.08
HIF3A-202ENST00000244303 SCAMP5Q8TAC9 235 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 NXNL1Q96CM4 212 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 CATSPER2Q96P56 530 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 ARHGAP39Q9C0H5 1083 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 UPF3AQ9H1J1 476 aaKnown RBP14.57□□□□□ -0.08
HIF3A-202ENST00000244303 AGO3Q9H9G7 860 aaKnown RBP14.57□□□□□ -0.08
HIF3A-202ENST00000244303 GLOD4Q9HC38 313 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 TMLHEQ9NVH6 421 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 SLC2A6Q9UGQ3 507 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 GABRQQ9UN88 632 aa14.57□□□□□ -0.08
HIF3A-202ENST00000244303 MAFKO60675 156 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 ANXA9O76027 345 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 IGLV3-25P01717 112 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 COL6A2P12110 1019 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 STMN1P16949 149 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 PPARGP37231 505 aaPredicted RBP14.56□□□□□ -0.08
HIF3A-202ENST00000244303 SLC1A2P43004 574 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 ARCN1P48444 511 aaKnown RBP14.56□□□□□ -0.08
HIF3A-202ENST00000244303 NSUN2Q08J23 767 aaKnown RBP eCLIP14.56□□□□□ -0.08
HIF3A-202ENST00000244303 MGAT3Q09327 533 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 PDCD2Q16342 344 aaPredicted RBP14.56□□□□□ -0.08
HIF3A-202ENST00000244303 NXNQ6DKJ4 435 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 LCA5Q86VQ0 697 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 DSELQ8IZU8 1212 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 RP9Q8TA86 221 aaKnown RBP14.56□□□□□ -0.08
HIF3A-202ENST00000244303 ZFAND2BQ8WV99 257 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 MARK4Q96L34 752 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 GPR78Q96P69 363 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 IL12RB2Q99665 862 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 OMDQ99983 421 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 SLC39A8Q9C0K1 460 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 ZNF385DQ9H6B1 395 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 NDFIP2Q9NV92 336 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 ARHGEF38Q9NXL2 777 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 STK39Q9UEW8 545 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 CDYLQ9Y232 598 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 GIT1Q9Y2X7 761 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 SCN10AQ9Y5Y9 1956 aa14.56□□□□□ -0.08
HIF3A-202ENST00000244303 KLHL33A6NCF5 533 aa14.55□□□□□ -0.08
HIF3A-202ENST00000244303 IRAK2O43187 625 aa14.55□□□□□ -0.08
HIF3A-202ENST00000244303 ODC1P11926 461 aa14.55□□□□□ -0.08
HIF3A-202ENST00000244303 UQCRBP14927 111 aa14.55□□□□□ -0.08
HIF3A-202ENST00000244303 BRCC3P46736 316 aa14.55□□□□□ -0.08
HIF3A-202ENST00000244303 CYLC2Q14093 348 aaPredicted RBP14.55□□□□□ -0.08
HIF3A-202ENST00000244303 TSTD2Q5T7W7 516 aa14.55□□□□□ -0.08
HIF3A-202ENST00000244303 FAM171BQ6P995 826 aa14.55□□□□□ -0.08
HIF3A-202ENST00000244303 C16orf89Q6UX73 402 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms