RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 CLCN4P51793 760 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 SLC7A9P82251 487 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 CAMK1Q14012 370 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 STXBP5Q5T5C0 1151 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 GRTP1Q5TC63 336 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 GKAP1Q5VSY0 366 aaPredicted RBP13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 CGB2Q6NT52 195 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 ESRP1Q6NXG1 681 aaKnown RBP13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 SLC25A41Q8N5S1 370 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 MAB21L3Q8N8X9 362 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 PTCD2Q8WV60 388 aaKnown RBP13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 MRPS31Q92665 395 aaKnown RBP13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 NSMCE3Q96MG7 304 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 FAM111AQ96PZ2 611 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 SEMA3CQ99985 751 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 ELAC2Q9BQ52 826 aaKnown RBP13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 C17orf80Q9BSJ5 609 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 SPON2Q9BUD6 331 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 POLR1EQ9GZS1 481 aaKnown RBP13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 TREX1Q9NSU2 369 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 SLC2A6Q9UGQ3 507 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 PLLPQ9Y342 182 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 A0A1W2PRU2 124 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 CCL16O15467 120 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 SNX3O60493 162 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 CSPG5O95196 566 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 CD160O95971 181 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 GLUD1P00367 558 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 ATXN1LP0C7T5 689 aaKnown RBP13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 ALADP13716 330 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 CRHR1P34998 444 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 OXCT1P55809 520 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 FSCBQ5H9T9 825 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 PPHLN1Q8NEY8 458 aaKnown RBP13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 RBBP8Q99708 897 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 MGME1Q9BQP7 344 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 SLC13A1Q9BZW2 595 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 VPS11Q9H270 941 aa13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 IARS2Q9NSE4 1012 aaKnown RBP13.94□□□□□ -0.18
SNRNP27-201ENST00000244227 GOLGA8TH3BQL2 631 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 TBL1XO60907 577 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 CCR2P41597 374 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 RGRP47804 291 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 ZNF235Q14590 738 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 CYTH1Q15438 398 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 RNF219Q5W0B1 726 aaPredicted RBP13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 PDPK2PQ6A1A2 396 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 HTR3DQ70Z44 454 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 STRA8Q7Z7C7 330 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 CACNA2D3Q8IZS8 1091 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 NDUFAF2Q8N183 169 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 ACMSDQ8TDX5 336 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 ZNF75CPQ92670 426 aaPredicted RBP13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 ISL2Q96A47 359 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 PSKH2Q96QS6 385 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 RANBP9Q96S59 729 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 SLC46A2Q9BY10 475 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 PCMTD2Q9NV79 361 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 HCFC1R1Q9NWW0 138 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 UBA2Q9UBT2 640 aaPredicted RBP13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 OR51B4Q9Y5P0 310 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 MYLKQ15746 1914 aa13.93□□□□□ -0.18
SNRNP27-201ENST00000244227 WDR91A4D1P6 747 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 C5orf67F2Z3F1 127 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 TPP1O14773 563 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 ZMPSTE24O75844 475 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 TOP3BO95985 862 aaKnown RBP13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 MYOGP15173 224 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 CR2P20023 1033 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 CDC25CP30307 473 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 IRS1P35568 1242 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 MAGEA12P43365 314 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 SERPINH1P50454 418 aaKnown RBP13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 LIMK2P53671 638 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 ARF5P84085 180 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 SF3A3Q12874 501 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 RFTN1Q14699 578 aaPredicted RBP13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 ZKSCAN8Q15776 578 aaPredicted RBP13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 SIRPB2Q5JXA9 342 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 ARMC3Q5W041 872 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 ZNF783Q6ZMS7 281 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 SPATS2Q86XZ4 545 aaKnown RBP13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 CNTN4Q8IWV2 1026 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 WFDC5Q8TCV5 224 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 TMA16Q96EY4 203 aaKnown RBP13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 CORO1BQ9BR76 489 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 NSRP1Q9H0G5 558 aaKnown RBP13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 SLCO1B3Q9NPD5 702 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 TLR9Q9NR96 1032 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 SEPT3Q9UH03 358 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 DENND4CQ5VZ89 1909 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 MOSPD3O75425 235 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 VAPBO95292 243 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 C1RP00736 705 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 CKMP06732 381 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 MYL4P12829 197 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 GABRB3P28472 473 aa13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 MZF1P28698 734 aaPredicted RBP13.92□□□□□ -0.18
SNRNP27-201ENST00000244227 SPRP35270 261 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms