RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 KIAA1211LQ6NV74 962 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 DPY19L3Q6ZPD9 716 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 NUDT18Q6ZVK8 323 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 PCDH20Q8N6Y1 951 aaKnown RBP20.42■□□□□ 0.86
SNRPA-201ENST00000243563 GRK7Q8WTQ7 553 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 EDAQ92838 391 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 ISG20Q96AZ6 181 aaKnown RBP20.42■□□□□ 0.86
SNRPA-201ENST00000243563 RBM15Q96T37 977 aaKnown RBP eCLIP20.42■□□□□ 0.866e-7■□□□□ 11.3
SNRPA-201ENST00000243563 VAT1Q99536 393 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 NOD2Q9HC29 1040 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 UBP1Q9NZI7 540 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 RSPH14Q9UHP6 348 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 BDP1A6H8Y1 2624 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 MT-CYBP00156 380 aaPredicted RBP20.42■□□□□ 0.86
SNRPA-201ENST00000243563 CTSLP07711 333 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 IVDP26440 423 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 SCNN1BP51168 640 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 CCNHP51946 323 aaPredicted RBP20.42■□□□□ 0.86
SNRPA-201ENST00000243563 SIGLEC14Q08ET2 396 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 PPP1R7Q15435 360 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 TRADDQ15628 312 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 ARHGEF18Q6ZSZ5 1173 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 KDM1BQ8NB78 822 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 OR2AP1Q8NGE2 309 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 IMP4Q96G21 291 aaKnown RBP20.42■□□□□ 0.86
SNRPA-201ENST00000243563 SHDQ96IW2 340 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 POLR1EQ9GZS1 481 aaKnown RBP20.42■□□□□ 0.86
SNRPA-201ENST00000243563 CD248Q9HCU0 757 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 TRHDEQ9UKU6 1024 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 NCOR1O75376 2440 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 DCXO43602 365 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 NEBLO76041 1014 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 STK10O94804 968 aaKnown RBP20.41■□□□□ 0.86
SNRPA-201ENST00000243563 GSRP00390 522 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 EPHX1P07099 455 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 CD86P42081 329 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 SKOR1P84550 965 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 LMNB2Q03252 620 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 GPS1Q13098 491 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 CARD16Q5EG05 197 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 CWF19L1Q69YN2 538 aaKnown RBP20.41■□□□□ 0.86
SNRPA-201ENST00000243563 C8orf74Q6P047 294 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 SRLQ86TD4 932 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 STK40Q8N2I9 435 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 PJA1Q8NG27 643 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 EXOC4Q96A65 974 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 TADA1Q96BN2 335 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 NUDCD1Q96RS6 583 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 GABRG3Q99928 467 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 TRIM31Q9BZY9 425 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 EPC1Q9H2F5 836 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 ETNK1Q9HBU6 452 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 PRSS16Q9NQE7 514 aa20.41■□□□□ 0.86
SNRPA-201ENST00000243563 DMGDHQ9UI17 866 aaKnown RBP20.41■□□□□ 0.86
SNRPA-201ENST00000243563 A0A1W2PQF6 199 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 TCRBV7S3A2A0A539 114 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 SLU7O95391 586 aaKnown RBP20.4■□□□□ 0.86
SNRPA-201ENST00000243563 PIGNO95427 931 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 GAS8O95995 478 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 NTSR1P30989 418 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 NNMTP40261 264 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 METAP1P53582 386 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 MRPS21P82921 87 aaKnown RBP20.4■□□□□ 0.86
SNRPA-201ENST00000243563 NCEH1Q6PIU2 408 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 GDAP1L1Q96MZ0 367 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 RUNDC3BQ96NL0 473 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 FCRL5Q96RD9 977 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 SLC25A51Q9H1U9 297 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 PAK5Q9P286 719 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 WASF2Q9Y6W5 498 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 A0A0C4DFX4 3053 aa20.4■□□□□ 0.86
SNRPA-201ENST00000243563 EDDM13A0A1B0GTR0 161 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 IGSF6O95976 241 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 NSUN2Q08J23 767 aaKnown RBP eCLIP20.39■□□□□ 0.86
SNRPA-201ENST00000243563 MYLK3Q32MK0 819 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 FBXO43Q4G163 708 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 TEX35Q5T0J7 233 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 ANKRD22Q5VYY1 191 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 KDELC1Q6UW63 502 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 TMEM92Q6UXU6 159 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 TRIM67Q6ZTA4 783 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 BBS5Q8N3I7 341 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 RYBPQ8N488 228 aaPredicted RBP20.39■□□□□ 0.86
SNRPA-201ENST00000243563 CCDC26Q8TAB7 109 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 FAM129BQ96TA1 746 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 FERMT1Q9BQL6 677 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 SLC6A17Q9H1V8 727 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 ZDHHC6Q9H6R6 413 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 SCUBE2Q9NQ36 999 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 RAB6BQ9NRW1 208 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.39■□□□□ 0.865e-6■■□□□ 11.5
SNRPA-201ENST00000243563 ASIC3Q9UHC3 531 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 SARDHQ9UL12 918 aa20.39■□□□□ 0.86
SNRPA-201ENST00000243563 MRPS17Q9Y2R5 130 aaKnown RBP20.39■□□□□ 0.86
SNRPA-201ENST00000243563 V9GYY5 206 aaPredicted RBP20.39■□□□□ 0.86
SNRPA-201ENST00000243563 ESYT3A0FGR9 886 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 BHMG1C9JSJ3 638 aaPredicted RBP20.38■□□□□ 0.85
SNRPA-201ENST00000243563 TP73O15350 636 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 PI15O43692 258 aa20.38■□□□□ 0.85
SNRPA-201ENST00000243563 DCNP07585 359 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms