RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 DNAH12Q6ZR08 3092 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 ZSCAN5CA6NGD5 496 aaPredicted RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 BIRC5O15392 142 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 TTI1O43156 1089 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 MOSPD3O75425 235 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 GRAP2O75791 330 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 RHOQP17081 205 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 SP100P23497 879 aaPredicted RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 IL1R2P27930 398 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 DPP6P42658 865 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 CDH6P55285 790 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 USP4Q13107 963 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 DPYSQ14117 519 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 ANKRD20A8PQ5CZ79 823 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 RABGAP1LQ5R372 815 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 CEP128Q6ZU80 1094 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 TPRG1Q6ZUI0 275 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 SPATC1Q76KD6 591 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 TMEM150AQ86TG1 271 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 NDUFAF2Q8N183 169 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 ZNF687Q8N1G0 1237 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 SPEM1Q8N4L4 309 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 ZBTB44Q8NCP5 570 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 BBOF1Q8ND07 529 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 PEBP4Q96S96 227 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 TKTL2Q9H0I9 626 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 ZNF700Q9H0M5 742 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 VCX3BQ9H321 246 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 IKBKGQ9Y6K9 419 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 A6NHS1 94 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 PIK3R2O00459 728 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 KRIT1O00522 736 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 COCHO43405 550 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 ACSL4O60488 711 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 HEXIM1O94992 359 aaKnown RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 RASGRP1O95267 797 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 GJB6O95452 261 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 FGGP02679 453 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 ITGAVP06756 1048 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 MYL4P12829 197 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 GABRR2P28476 465 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 TNFRSF8P28908 595 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 NDST2P52849 883 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 DRG2P55039 364 aaKnown RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 YBEYP58557 167 aaPredicted RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 GUCY2DQ02846 1103 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 RNF43Q68DV7 783 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 SCYL2Q6P3W7 929 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 ADAT2Q7Z6V5 191 aaKnown RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 RASSF3Q86WH2 238 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 CPNE8Q86YQ8 564 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 CDKL3Q8IVW4 592 aaPredicted RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 ZSCAN18Q8TBC5 510 aaPredicted RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 IFT81Q8WYA0 676 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 EDEM1Q92611 657 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 KXD1Q9BQD3 176 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 EPB41L5Q9HCM4 733 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 SPATA6Q9NWH7 488 aaPredicted RBP9.5□□□□□ -0.89
TGFB3-201ENST00000238682 OSER1Q9NX31 292 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 AMACRQ9UHK6 382 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 GTF2A1LQ9UNN4 478 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 TECTAO75443 2155 aa9.5□□□□□ -0.89
TGFB3-201ENST00000238682 SLC12A8A0AV02 714 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 TYW5A2RUC4 315 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 FAM170BA6NMN3 283 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 ARNTLO00327 626 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 EEF2KO00418 725 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 CHKAP35790 457 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 EIF1AXP47813 144 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 NTHL1P78549 312 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 ACTN3Q08043 901 aaPredicted RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 NME3Q13232 169 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 BLMHQ13867 455 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 TRADDQ15628 312 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 SEPT7Q16181 437 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 CDO1Q16878 200 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 LAIR1Q6GTX8 287 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 MFSD7Q6UXD7 560 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 VITQ6UXI7 678 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 Q6ZNB5 142 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 RFX8Q6ZV50 586 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 WDR5BQ86VZ2 330 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 CPA6Q8N4T0 437 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 ARL10Q8N8L6 244 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 BPIFB1Q8TDL5 484 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 RSAD2Q8WXG1 361 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 FAM3CQ92520 227 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 CSPG4P5Q96PW8 444 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 SMC6Q96SB8 1091 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 KCTD15Q96SI1 283 aaPredicted RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 VAT1Q99536 393 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 PRMT1Q99873 361 aaKnown RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 RAB17Q9H0T7 212 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 MAGED2Q9UNF1 606 aaPredicted RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 MAGED1Q9Y5V3 778 aaPredicted RBP9.49□□□□□ -0.89
TGFB3-201ENST00000238682 ANAPC1Q9H1A4 1944 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 HEPACAM2A8MVW5 462 aa9.49□□□□□ -0.89
TGFB3-201ENST00000238682 CHURC1-FNTBB4DL54 471 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms