RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ADGRF2Q8IZF7 708 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 C12orf50Q8NA57 414 aaPredicted RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 CITED4Q96RK1 184 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 NT5MQ9NPB1 228 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ITGA2BP08514 1039 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 SLC18A1P54219 525 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 RAB10P61026 200 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 MFSD14CQ5VZR4 134 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ZPBP2Q6X784 338 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PTAR1Q7Z6K3 402 aaPredicted RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 PACRGLQ8N7B6 248 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 SLC44A1Q8WWI5 657 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 CD101Q93033 1021 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 APBA2Q99767 749 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 SH2D3AQ9BRG2 576 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 TAS2R1Q9NYW7 299 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 OPTCQ9UBM4 332 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PLA2G4CQ9UP65 541 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 A0A087X0B3 334 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PGRMC2O15173 223 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 NFKB1P19838 968 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 BAG6P46379 1132 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PAGE2BQ5JRK9 111 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PPP1R15BQ5SWA1 713 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 BHLHB9Q6PI77 547 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 CLYBLQ8N0X4 340 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ARL10Q8N8L6 244 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 FBXO30Q8TB52 745 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ROPN1LQ96C74 230 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 TRPC4Q9UBN4 977 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 SLC25A13Q9UJS0 675 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 SLC22A1O15245 554 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 FGF10O15520 208 aaPredicted RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 SLC6A3Q01959 620 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ACOT1Q86TX2 421 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 ATL1Q8WXF7 558 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 TEFMQ96QE5 360 aaKnown RBP8.3□□□□□ -1.08
APOB-201ENST00000233242 OSBPL7Q9BZF2 842 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 VPS51Q9UID3 782 aa8.3□□□□□ -1.08
APOB-201ENST00000233242 PRR5-ARHGAP8B1AHC4 643 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 COL6A2P12110 1019 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ARHGAP8P85298 464 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 DRAXINQ8NBI3 349 aaPredicted RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 LRRC20Q8TCA0 184 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 HTRA1Q92743 480 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 KAT2BQ92831 832 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 TMEM138Q9NPI0 162 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SPEF1Q9Y4P9 236 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 FAM240BA0A1B0GVZ2 78 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 OR6B1O95007 311 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SCRN3Q0VDG4 424 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 LCN1P1Q5VSP4 162 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 STAU1O95793 577 aaKnown RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 MT-CO1P00395 513 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 STAG3L1P0CL83 205 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 YWHAQP27348 245 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SLC7A2P52569 658 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ZIK1Q3SY52 487 aaPredicted RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 DNAJC14Q6Y2X3 702 aaPredicted RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 PSTKQ8IV42 348 aaKnown RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 APOL2Q9BQE5 337 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SH3BP1Q9Y3L3 701 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 RCCD1A6NED2 376 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 PSMA1P25786 263 aaKnown RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 YWHAZP63104 245 aaKnown RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 ITGA7Q13683 1181 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 HERC6Q8IVU3 1022 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 BRSK2Q8IWQ3 736 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ZBTB8BQ8NAP8 495 aaPredicted RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 NELL1Q92832 810 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 PRKAG3Q9UGI9 489 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 A0A0G2JLW4 131 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ALDH1A2O94788 518 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 DSG3P32926 999 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ACTR3P61158 418 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 OOSP2Q86WS3 158 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SHC3Q92529 594 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ROBO3Q96MS0 1386 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 AZIN1O14977 448 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 CHST10O43529 356 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ERVK-10P10266 1014 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 CDC42EP5Q6NZY7 148 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ZCCHC2Q9C0B9 1178 aaKnown RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 KCNQ5Q9NR82 932 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 BLOC1S4Q9NUP1 217 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 PRKCQQ04759 706 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 ERICH5Q6P6B1 374 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 POTEHQ6S545 545 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 CDYL2Q8N8U2 506 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 VPS35Q96QK1 796 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 UNC93B1Q9H1C4 597 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 GPATCH2LQ9NWQ4 482 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 G3V2T6 193 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 BCKDKO14874 412 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 BMP6P22004 513 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 PTGES3Q15185 160 aaKnown RBP8.29□□□□□ -1.08
APOB-201ENST00000233242 BMT2Q1RMZ1 405 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 SLC9A8Q9Y2E8 581 aa8.29□□□□□ -1.08
APOB-201ENST00000233242 IFNA7P01567 189 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms