RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 GPR25O00155 361 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 PIGRP01833 764 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 MYL4P12829 197 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 TSPAN8P19075 237 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 CNTFP26441 200 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 ARL4AP40617 200 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 YAP1P46937 504 aaKnown RBP14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 HARS2P49590 506 aaKnown RBP14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 ARL13BQ3SXY8 428 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 ZFP1Q6P2D0 407 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 ZPBP2Q6X784 338 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 PEX5LQ8IYB4 626 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 PNPLA1Q8N8W4 532 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 FAM110BQ8TC76 370 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 URGCPQ8TCY9 931 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 CHPT1Q8WUD6 406 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 P2RY11Q96G91 374 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 STN1Q9H668 368 aaKnown RBP14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 H3BMQ9 156 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 TOR1BO14657 336 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 MFSD11O43934 449 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 FAM189A1O60320 539 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 STAG3L1P0CL83 205 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 SPRP35270 261 aaPredicted RBP14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 ALDH3B2P48448 385 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 PLK1P53350 603 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 RAB15P59190 212 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 POU5F1BQ06416 359 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 MPZL3Q6UWV2 235 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 KCTD4Q8WVF5 259 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 COG8Q96MW5 612 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 CSPG4P5Q96PW8 444 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 ACE2Q9BYF1 805 aaPredicted RBP14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 CDT1Q9H211 546 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 NCKIPSDQ9NZQ3 722 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 CDYLQ9Y232 598 aa14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 MAFBQ9Y5Q3 323 aaPredicted RBP14.33□□□□□ -0.11
PCDHB3-201ENST00000231130 ATP6AP2A0A1C7CYW4 349 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 ZNF839A8K0R7 811 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 SPATA31C2B4DYI2 1134 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 HDAC3O15379 428 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 ATP6AP2O75787 350 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 DDHD2O94830 711 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 VDRP11473 427 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 PGAM1P18669 254 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 RPL14P50914 215 aaKnown RBP14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 USP10Q14694 798 aaKnown RBP14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 PIGGQ5H8A4 983 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 TIFABQ6ZNK6 161 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 KCTD15Q96SI1 283 aaPredicted RBP14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 MARCH7Q9H992 704 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 ANKRD34BA5PLL1 514 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 NEMP2A6NFY4 417 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 GCATO75600 419 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 UBA1P22314 1058 aaKnown RBP14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 CTBSQ01459 385 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 OCA2Q04671 838 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 CDK18Q07002 472 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 NIPAL4Q0D2K0 466 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 FIBCD1Q8N539 461 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 BPIFB6Q8NFQ5 453 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 ACMSDQ8TDX5 336 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 APBB2Q92870 758 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 GJD4Q96KN9 370 aaPredicted RBP14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 PCYT2Q99447 389 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 OSBPL11Q9BXB4 747 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 TMEM134Q9H6X4 195 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 RPF2Q9H7B2 306 aaKnown RBP14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 POLE4Q9NR33 117 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 CHRAC1Q9NRG0 131 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 OLAHQ9NV23 265 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 SLC8A2Q9UPR5 921 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 TIMM22Q9Y584 194 aa14.33□□□□□ -0.12
PCDHB3-201ENST00000231130 A0A0A0MRY4 1105 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 NR4A2P43354 598 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 EFNA5P52803 228 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 RAD23AP54725 363 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 MOGQ16653 247 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 CADM3Q8N126 398 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 ZC3H15Q8WU90 426 aaKnown RBP14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 SPATA13Q96N96 652 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 HGH1Q9BTY7 390 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 NT5C1AQ9BXI3 368 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 PRDM12Q9H4Q4 367 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 GNPTGQ9UJJ9 305 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 V9GYQ6 96 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 E7ENX8 843 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 G3V2L1 256 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 NRP1O14786 923 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 GUCY1B2O75343 617 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 TPSB2P20231 275 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 PMS2P3Q13401 168 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 IKBKEQ14164 716 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 PRPSAP1Q14558 356 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 TPSAB1Q15661 275 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 IGFN1Q86VF2 1251 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 TTC30AQ86WT1 665 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 OFCC1Q8IZS5 231 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 NAT16Q8N8M0 369 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms