RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OR2T34Q8NGX1 318 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 LRRN4Q8WUT4 740 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 CASKIN2Q8WXE0 1202 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 FAM131CQ96AQ9 280 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 GDAP1L1Q96MZ0 367 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 ZNF670Q9BS34 389 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 DESI2Q9BSY9 194 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 PCED1AQ9H1Q7 454 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
LSM5-201ENST00000223084 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.88□□□□□ -0.35
LSM5-201ENST00000223084 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 CACNA1EQ15878 2313 aa12.88□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3DA0A087WVF3 549 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3IA0A087WXS9 549 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3EA0A087X179 549 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3KA0A087X1G2 549 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 A0A0A6YYK5 440 aaPredicted RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3FA6NER0 549 aaPredicted RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 LRRC72A6NJI9 287 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 GOLGA6L6A8MZA4 724 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3LB9A6J9 549 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 PLRG1O43660 514 aaKnown RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 PALMO75781 387 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 POP4O95707 220 aaKnown RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 IGSF6O95976 241 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 KRT1P04264 644 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 UGT2B4P06133 528 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3HP0C7X1 549 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 RGRP47804 291 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 TAS2R38P59533 333 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 PPP2CBP62714 309 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 PPP2CAP67775 309 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 LMNB2Q03252 620 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 IL10RBQ08334 325 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 RSPO4Q2I0M5 234 aaPredicted RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3GQ6DHY5 549 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3CQ6IPX1 549 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 ERN2Q76MJ5 926 aaKnown RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 MAP7D3Q8IWC1 876 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 RHOT1Q8IXI2 618 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 TBC1D3Q8IZP1 549 aaPredicted RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 TSEN2Q8NCE0 465 aaKnown RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 TPCN2Q8NHX9 752 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 RNF25Q96BH1 459 aaPredicted RBP12.87□□□□□ -0.35
LSM5-201ENST00000223084 FAF2Q96CS3 445 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 EBF2Q9HAK2 575 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 DYRK4Q9NR20 520 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 DMXL1Q9Y485 3027 aa12.87□□□□□ -0.35
LSM5-201ENST00000223084 LNP1A1A4G5 178 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 TTC24A2A3L6 582 aaPredicted RBP12.86□□□□□ -0.35
LSM5-201ENST00000223084 MUSKO15146 869 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 BCAT2O15382 392 aaPredicted RBP12.86□□□□□ -0.35
LSM5-201ENST00000223084 SLC7A4O43246 635 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 MAFKO60675 156 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 GJB3O75712 270 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 PIGNO95427 931 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 PEX11BO96011 259 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 ITGB7P26010 798 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 SERPINB6P35237 376 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 DPP6P42658 865 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 VAV2P52735 878 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 NAP1L1P55209 391 aaKnown RBP12.86□□□□□ -0.35
LSM5-201ENST00000223084 SLC10A7Q0GE19 358 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 PAFAH1B3Q15102 231 aaKnown RBP12.86□□□□□ -0.35
LSM5-201ENST00000223084 LLGL1Q15334 1064 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 LRRC38Q5VT99 294 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 SLC23A3Q6PIS1 610 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 LAYNQ6UX15 382 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 PARS2Q7L3T8 475 aaKnown RBP12.86□□□□□ -0.35
LSM5-201ENST00000223084 DAAM2Q86T65 1068 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 KIAA1328Q86T90 577 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 ATPAF2Q8N5M1 289 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 C1orf216Q8TAB5 229 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 CEP76Q8TAP6 659 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 RMDN1Q96DB5 314 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 KLHL32Q96NJ5 620 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 RNF157Q96PX1 679 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 ORAI3Q9BRQ5 295 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 EDEM2Q9BV94 578 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 CINPQ9BW66 212 aaPredicted RBP12.86□□□□□ -0.35
LSM5-201ENST00000223084 HDAC8Q9BY41 377 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 CAPN10Q9HC96 672 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 TRIM10Q9UDY6 481 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 SLC6A14Q9UN76 642 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 LAMA1P25391 3075 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 TRPM6Q9BX84 2022 aa12.86□□□□□ -0.35
LSM5-201ENST00000223084 ASCC3Q8N3C0 2202 aaKnown RBP12.85□□□□□ -0.35
LSM5-201ENST00000223084 PLXNA2O75051 1894 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 A0A1B0GTW7 788 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 C16orf96A6NNT2 1141 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 PRR5-ARHGAP8B1AHC4 643 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 C10orf142B7Z368 130 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 PJA2O43164 708 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 SERPINF2P08697 491 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 GNSP15586 552 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 CD27P26842 260 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 MAT2AP31153 395 aaKnown RBP12.85□□□□□ -0.35
LSM5-201ENST00000223084 HOXD12P35452 270 aa12.85□□□□□ -0.35
LSM5-201ENST00000223084 MARCKSL1P49006 195 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms