RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 JUNP05412 331 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 ENO3P13929 434 aaPredicted RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 AVPR1AP37288 418 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 RPL5P46777 297 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 ARCN1P48444 511 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 GRB14Q14449 540 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 POTEHQ6S545 545 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 OTOP3Q7RTS5 596 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 BHLHA9Q7RTU4 235 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 SATL1Q86VE3 508 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 AHI1Q8N157 1196 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 PPHLN1Q8NEY8 458 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 NLGN2Q8NFZ4 835 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 DGCR14Q96DF8 476 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 DTNBP1Q96EV8 351 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 SENP8Q96LD8 212 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 MRPL57Q9BQC6 102 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 OSBPL2Q9H1P3 480 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 MRPL40Q9NQ50 206 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 ACSS2Q9NR19 701 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 SLC38A7Q9NVC3 462 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 ETAA1Q9NY74 926 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 G3BP2Q9UN86 482 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 SLC45A1Q9Y2W3 748 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 COL4A4P53420 1690 aaPredicted RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 TCAF2A6NFQ2 919 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 HHLA1C9JL84 531 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 ACOT8O14734 319 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 TNFAIP8O95379 198 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 PGK1P00558 417 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 CYP2C18P33260 490 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 PSMD8P48556 350 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 CRYBB1P53674 252 aaPredicted RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 PKNOX1P55347 436 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 MS4A2Q01362 244 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 PDCD2Q16342 344 aaPredicted RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 CEP97Q8IW35 865 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 CEP70Q8NHQ1 597 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 SMARCD1Q96GM5 515 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 CELF6Q96J87 481 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 FAR2Q96K12 515 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 ZFRQ96KR1 1074 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 PRICKLE1Q96MT3 831 aaPredicted RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 CNOT11Q9UKZ1 510 aaKnown RBP13.47□□□□□ -0.25
SRP54-201ENST00000216774 SNX10Q9Y5X0 201 aa13.47□□□□□ -0.25
SRP54-201ENST00000216774 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 PDHXO00330 501 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 CFLARO15519 480 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 VAPBO95292 243 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 RGS2P41220 211 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 DPP6P42658 865 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 RABGGTBP53611 331 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 MPP1Q00013 466 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 MFSD10Q14728 455 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 PPP2R5DQ14738 602 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 LDLRAD1Q5T700 205 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 TSTD2Q5T7W7 516 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 ARMC3Q5W041 872 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 GPR142Q7Z601 462 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 MFSD6LQ8IWD5 586 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 LILRA2Q8N149 483 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 PELI3Q8N2H9 469 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 CCNYL1Q8N7R7 359 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 EDEM1Q92611 657 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 TOP1MTQ969P6 601 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 NXNL1Q96CM4 212 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.25
SRP54-201ENST00000216774 ZNF696Q9H7X3 374 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 COPS7BQ9H9Q2 264 aaPredicted RBP13.46□□□□□ -0.25
SRP54-201ENST00000216774 TMEM30AQ9NV96 361 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 UBAP1Q9NZ09 502 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 CLIC5Q9NZA1 410 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 CDH9Q9ULB4 789 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 TCAF1Q9Y4C2 921 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 AP4B1Q9Y6B7 739 aa13.46□□□□□ -0.25
SRP54-201ENST00000216774 CCDC78A2IDD5 438 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 TRIM38O00635 465 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 SDHDO14521 159 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 DYNC1LI2O43237 492 aaPredicted RBP13.46□□□□□ -0.26
SRP54-201ENST00000216774 CLPTM1O96005 669 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 PAMP19021 973 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 ATP5F1P24539 256 aaPredicted RBP13.46□□□□□ -0.26
SRP54-201ENST00000216774 YY1P25490 414 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 ARNTP27540 789 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 POU4F1Q01851 419 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 CREB5Q02930 508 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 CTBP1Q13363 440 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 MAP7Q14244 749 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 POU6F1Q14863 301 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 DENND5AQ6IQ26 1287 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 SPATA24Q86W54 205 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 DENND6AQ8IWF6 608 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 ATPAF2Q8N5M1 289 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 C2CD4AQ8NCU7 369 aaPredicted RBP13.46□□□□□ -0.26
SRP54-201ENST00000216774 SPATA22Q8NHS9 363 aa13.46□□□□□ -0.26
SRP54-201ENST00000216774 USP13Q92995 863 aaPredicted RBP13.46□□□□□ -0.26
SRP54-201ENST00000216774 ASB9Q96DX5 294 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms