RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 FAM153BP0C7A2 387 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 RARAP10276 462 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 CYBAP13498 195 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 ATP6V1B1P15313 513 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 IDSP22304 550 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 DGKAP23743 735 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 TLX1P31314 330 aaPredicted RBP13.89□□□□□ -0.19
SIX4-201ENST00000216513 FAM153CQ494X1 144 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 ALFQ53S48 1182 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 CLEC4FQ8N1N0 589 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 GTF2A1LQ9UNN4 478 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 ADGRA3Q8IWK6 1321 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 ENO4A6NNW6 628 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 GRXCR1A8MXD5 290 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 E9PAM4 449 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 GPR15P49685 360 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 USP7Q93009 1102 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 HEPHQ9BQS7 1158 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 H2AFY2Q9P0M6 372 aaPredicted RBP13.89□□□□□ -0.19
SIX4-201ENST00000216513 ACOT9Q9Y305 439 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 MAGEB16A2A368 324 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 ERBB2P04626 1255 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 SLC10A6Q3KNW5 377 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 STK40Q8N2I9 435 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 HLA-CQ95604 372 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 REPS1Q96D71 796 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 IGSF21Q96ID5 467 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 PWWP2AQ96N64 755 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 INSL5Q9Y5Q6 135 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 SNX5Q9Y5X3 404 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 C9IYK1 514 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 NPY2RP49146 381 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 ITGA9Q13797 1035 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 ARSHQ5FYA8 562 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 CHST15Q7LFX5 561 aaPredicted RBP13.89□□□□□ -0.19
SIX4-201ENST00000216513 OR7D4Q8NG98 312 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 MARK4Q96L34 752 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 MANSC1Q9H8J5 431 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 E9PBE3 544 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 KLHL41O60662 606 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 TBX18O95935 607 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 SLC2A4P14672 509 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 RGS1Q08116 209 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 SF1Q15637 639 aaKnown RBP13.89□□□□□ -0.19
SIX4-201ENST00000216513 MFSD14AQ96MC6 490 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 KLHL32Q96NJ5 620 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 DUSP9Q99956 384 aaKnown RBP13.89□□□□□ -0.19
SIX4-201ENST00000216513 THUMPD3Q9BV44 507 aaKnown RBP13.89□□□□□ -0.19
SIX4-201ENST00000216513 BTBD1Q9H0C5 482 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 HBS1LQ9Y450 684 aaKnown RBP13.89□□□□□ -0.19
SIX4-201ENST00000216513 PRKAB1Q9Y478 270 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 PCDHGA4Q9Y5G9 962 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 GCATO75600 419 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 GLI1P08151 1106 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ERCC2P18074 760 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ITPRIPL2Q3MIP1 535 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ZCCHC23Q6ZST2 131 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 RNF148Q8N7C7 305 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 VAT1Q99536 393 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ERP44Q9BS26 406 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 DNAJB4Q9UDY4 337 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 CYP8B1Q9UNU6 501 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ENTPD4Q9Y227 616 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 FAM208AQ9UK61 1670 aaKnown RBP13.88□□□□□ -0.19
SIX4-201ENST00000216513 WNT7AO00755 349 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 KDELR1P24390 212 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 DDX6P26196 483 aaKnown RBP eCLIP13.88□□□□□ -0.19
SIX4-201ENST00000216513 BMPR1AP36894 532 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 NUDT2P50583 147 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ACAP1Q15027 740 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 CLUHO75153 1309 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 TCRBV21S2A2A0A5A6 115 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ZNF865P0CJ78 1059 aaPredicted RBP13.88□□□□□ -0.19
SIX4-201ENST00000216513 BLKP51451 505 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 PDE12Q6L8Q7 609 aaKnown RBP13.88□□□□□ -0.19
SIX4-201ENST00000216513 FAM180AQ6UWF9 173 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ENPP7Q6UWV6 458 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 RASGRP3Q8IV61 690 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 PRSS58Q8IYP2 241 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 SLC22A17Q8WUG5 538 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 METTL21AQ8WXB1 218 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 LMLNQ96KR4 655 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 CARD9Q9H257 536 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 MRPL40Q9NQ50 206 aaKnown RBP13.88□□□□□ -0.19
SIX4-201ENST00000216513 FFAR2O15552 330 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 KRT33AO76009 404 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ATP4AP20648 1035 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 RPL6Q02878 288 aaKnown RBP13.88□□□□□ -0.19
SIX4-201ENST00000216513 CREB5Q02930 508 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 MAMLD1Q13495 774 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ANKLE1Q8NAG6 615 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 AP2M1Q96CW1 435 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 PRRG4Q9BZD6 226 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 PSMD13Q9UNM6 376 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 KLF8O95600 359 aaPredicted RBP13.88□□□□□ -0.19
SIX4-201ENST00000216513 ATP6V1C1P21283 382 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 BGNP21810 368 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 CTSOP43234 321 aaPredicted RBP13.88□□□□□ -0.19
SIX4-201ENST00000216513 Q8N9G6 341 aaPredicted RBP13.88□□□□□ -0.19
SIX4-201ENST00000216513 CD101Q93033 1021 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms