RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 RAMP2O60895 175 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 CALB1P05937 261 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 NUDT1P36639 197 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 PPP1R15BQ5SWA1 713 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 TPRG1LQ5T0D9 272 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 CCDC183Q5T5S1 534 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 NEK5Q6P3R8 708 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 DNAJC24Q6P3W2 148 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 FBXL19Q6PCT2 694 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 SLFN11Q7Z7L1 901 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 ANKRD20A12PQ8NF67 263 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 NTAN1Q96AB6 310 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 PPP1R16AQ96I34 528 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 TMEM51Q9NW97 253 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 GPSM3Q9Y4H4 160 aa22.51■■□□□ 1.19
VTI1B-201ENST00000216456 KRIT1O00522 736 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 CREB3O43889 395 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 UGT2B4P06133 528 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 GIMD1P0DJR0 217 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 DGKAP23743 735 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 AKT2P31751 481 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 OVGP1Q12889 678 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 POLD3Q15054 466 aaPredicted RBP22.5■■□□□ 1.19
VTI1B-201ENST00000216456 ANO6Q4KMQ2 910 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 E4F1Q66K89 784 aaPredicted RBP22.5■■□□□ 1.19
VTI1B-201ENST00000216456 Q6ZSR6 202 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 IRF2BP2Q7Z5L9 587 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 PTAR1Q7Z6K3 402 aaPredicted RBP22.5■■□□□ 1.19
VTI1B-201ENST00000216456 ZNF354CQ86Y25 554 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 OXR1Q8N573 874 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 HMCESQ96FZ2 354 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 SYT11Q9BT88 431 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 SLC17A9Q9BYT1 436 aa22.5■■□□□ 1.19
VTI1B-201ENST00000216456 CHD5Q8TDI0 1954 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 IGLON5A6NGN9 336 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 C16orf96A6NNT2 1141 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 BUB1O43683 1085 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 EPHB2P29323 1055 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 ZNF143P52747 638 aaPredicted RBP22.49■■□□□ 1.19
VTI1B-201ENST00000216456 C1QBPQ07021 282 aaKnown RBP22.49■■□□□ 1.19
VTI1B-201ENST00000216456 PROX2Q3B8N5 592 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 HES3Q5TGS1 186 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 ABI3BPQ7Z7G0 1075 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 MCOLN2Q8IZK6 566 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 HNRNPLLQ8WVV9 542 aaKnown RBP22.49■■□□□ 1.19
VTI1B-201ENST00000216456 KLHL32Q96NJ5 620 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 MAGEH1Q9H213 219 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 KLHL11Q9NVR0 708 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 FZD10Q9ULW2 581 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 DAAM1Q9Y4D1 1078 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 PCDHGA1Q9Y5H4 931 aa22.49■■□□□ 1.19
VTI1B-201ENST00000216456 INSIG1O15503 277 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 KDELR3O43731 214 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 MAGEC1O60732 1142 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 NEBLO76041 1014 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 TMCC1O94876 653 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 JUPP14923 745 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 TARDBPQ13148 414 aaKnown RBP eCLIP22.48■■□□□ 1.19
VTI1B-201ENST00000216456 COL28A1Q2UY09 1125 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 MYLK3Q32MK0 819 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 ACAD10Q6JQN1 1059 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 RTL3Q8N8U3 475 aaKnown RBP22.48■■□□□ 1.19
VTI1B-201ENST00000216456 OR2AP1Q8NGE2 309 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 ISG20Q96AZ6 181 aaKnown RBP22.48■■□□□ 1.19
VTI1B-201ENST00000216456 EXOC2Q96KP1 924 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 KLF6Q99612 283 aaPredicted RBP22.48■■□□□ 1.19
VTI1B-201ENST00000216456 TRIM7Q9C029 511 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 TRPM6Q9BX84 2022 aa22.48■■□□□ 1.19
VTI1B-201ENST00000216456 TDRD6O60522 2096 aaKnown RBP22.48■■□□□ 1.19
VTI1B-201ENST00000216456 LOC400499M0QZD8 3231 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 PIAS2O75928 621 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 CKMT2P17540 419 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 RPS21P63220 83 aaKnown RBP22.47■■□□□ 1.19
VTI1B-201ENST00000216456 CCDC15Q0P6D6 951 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 FZD2Q14332 565 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 CA9Q16790 459 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 ZNF805Q5CZA5 627 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 EFHC2Q5JST6 749 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 TMC6Q7Z403 805 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 TMPRSS12Q86WS5 348 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 CRELD1Q96HD1 420 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 FEM1CQ96JP0 617 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 DNAJC28Q9NX36 388 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 KLF15Q9UIH9 416 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 ACACAQ13085 2346 aa22.47■■□□□ 1.19
VTI1B-201ENST00000216456 LRRC53A6NM62 1247 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 RASA4BC9J798 803 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 RASA4O43374 803 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 GSRP00390 522 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 FERP16591 822 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 ETFBP38117 255 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 KIAA1161Q6NSJ0 714 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 ARFGAP1Q8N6T3 406 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 PDCD7Q8N8D1 485 aaKnown RBP22.46■■□□□ 1.19
VTI1B-201ENST00000216456 CELF6Q96J87 481 aaKnown RBP22.46■■□□□ 1.19
VTI1B-201ENST00000216456 PEBP4Q96S96 227 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 CNPY3Q9BT09 278 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 RTN4Q9NQC3 1192 aaKnown RBP22.46■■□□□ 1.19
VTI1B-201ENST00000216456 HPCAL4Q9UM19 191 aa22.46■■□□□ 1.19
VTI1B-201ENST00000216456 CACNA1GO43497 2377 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms