RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 AADACL2Q6P093 401 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 NPNTQ6UXI9 565 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ENKURQ8TC29 256 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 TRIM8Q9BZR9 551 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 PDGFDQ9GZP0 370 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-201ENST00000215793 RGSL1A5PLK6 1076 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 BIRC5O15392 142 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 UQCRBP14927 111 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 RPL9P32969 192 aaKnown RBP13.7□□□□□ -0.22
SF3A1-201ENST00000215793 INHBEP58166 350 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 BST1Q10588 318 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 SPIDRQ14159 915 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 TAB1Q15750 504 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 MAPKAPK3Q16644 382 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 RAP1GAP2Q684P5 730 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ADAMTSL2Q86TH1 951 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 PYDC1Q8WXC3 89 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ACE2Q9BYF1 805 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ACP6Q9NPH0 428 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 KLHL1Q9NR64 748 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ZNF232Q9UNY5 417 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 GSTK1Q9Y2Q3 226 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 RAP2CQ9Y3L5 183 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 hCG_1818297A0A087WSY0 165 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 FAM237BA0A1B0GVD1 139 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 OPLAHO14841 1288 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ASNA1O43681 348 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 CSH1P0DML2 217 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 CSH2P0DML3 217 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 TLX1P31314 330 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-201ENST00000215793 CAPSQ13938 189 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 USP50Q70EL3 339 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-201ENST00000215793 LRRC52Q8N7C0 313 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ZFP28Q8NHY6 868 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 FNIP1Q8TF40 1166 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 HSD17B14Q9BPX1 270 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ATP13A3Q9H7F0 1226 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ARHGEF3Q9NR81 526 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ADCY6O43306 1168 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 PDE9AO76083 593 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ABCG1P45844 678 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 C21orf59P57076 290 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 RAB10P61026 200 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 TNK2Q07912 1038 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ZNF57Q68EA5 555 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-201ENST00000215793 DOK6Q6PKX4 331 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 FBXW8Q8N3Y1 598 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ELMO1Q92556 727 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 TSPAN18Q96SJ8 248 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 ZDHHC6Q9H6R6 413 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 SPAG4Q9NPE6 437 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 FBXO6Q9NRD1 293 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-201ENST00000215793 C3orf18Q9UK00 162 aa13.7□□□□□ -0.22
SF3A1-201ENST00000215793 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
SF3A1-201ENST00000215793 MYPNQ86TC9 1320 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 GRIA4P48058 902 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 THOP1P52888 689 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 CDC42P60953 191 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 ATP6V0D1P61421 351 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 VGLL4Q14135 290 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 CRELD2Q6UXH1 353 aaPredicted RBP13.69□□□□□ -0.22
SF3A1-201ENST00000215793 GATAD2AQ86YP4 633 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 SLC41A1Q8IVJ1 513 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 CAMKK1Q8N5S9 505 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 RP9Q8TA86 221 aaKnown RBP13.69□□□□□ -0.22
SF3A1-201ENST00000215793 WDR18Q9BV38 432 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.69□□□□□ -0.22
SF3A1-201ENST00000215793 SEMA6AQ9H2E6 1030 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
SF3A1-201ENST00000215793 NFKBIL1Q9UBC1 381 aaPredicted RBP13.69□□□□□ -0.22
SF3A1-201ENST00000215793 SPATA2Q9UM82 520 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 EFCAB10A6NFE3 127 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 NUDT14O95848 222 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 SHBGP04278 402 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 PSME3P61289 254 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 COPZ1P61923 177 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 BEX3Q00994 111 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 CCDC157Q569K6 752 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 LYPLAL1Q5VWZ2 237 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 BHLHB9Q6PI77 547 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 FBXO30Q8TB52 745 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 SPATA5L1Q9BVQ7 753 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 FAIM2Q9BWQ8 316 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 REXO4Q9GZR2 422 aaKnown RBP13.69□□□□□ -0.22
SF3A1-201ENST00000215793 CYLDQ9NQC7 956 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 ATP6V1HQ9UI12 483 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 VWDEQ8N2E2 1590 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 PEX11AO75192 247 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 UMPSP11172 480 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 COX4I1P13073 169 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 CES1P23141 567 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 POLD2P49005 469 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 ATP12AP54707 1039 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 PRKG2Q13237 762 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 ATP1A4Q13733 1029 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 ATP13A4Q4VNC1 1196 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 KRT77Q7Z794 578 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 CACTIN-AS1Q8N1I8 211 aa13.69□□□□□ -0.22
SF3A1-201ENST00000215793 SEMA3CQ99985 751 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms