RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 RFC1P35251 1148 aaPredicted RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 ACVRL1P37023 503 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 STAT1P42224 750 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 SOWAHCQ53LP3 525 aaPredicted RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 ZNF805Q5CZA5 627 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 FKBP15Q5T1M5 1219 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 FAM72AQ5TYM5 149 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 FAM72DQ6L9T8 149 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 Q6ZSR6 202 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 PARS2Q7L3T8 475 aaKnown RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 FAM72BQ86X60 149 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 OR2AP1Q8NGE2 309 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 SLC30A5Q8TAD4 765 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 PCDHB18PQ96TA0 734 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 USP29Q9HBJ7 922 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 FZD3Q9NPG1 666 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 FAM207AQ9NSI2 230 aaPredicted RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 FANCLQ9NW38 375 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 UCKL1Q9NWZ5 548 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 LIMA1Q9UHB6 759 aaKnown RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 CLCA2Q9UQC9 943 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 FCF1Q9Y324 198 aaKnown RBP16.15■□□□□ 0.18
ERCC1-201ENST00000013807 CSNK1G3Q9Y6M4 447 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 ANKRD36A6QL64 1941 aa16.15■□□□□ 0.18
ERCC1-201ENST00000013807 POM121BA6NF01 834 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 KDELR3O43731 214 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 LZTS3O60299 673 aaPredicted RBP16.14■□□□□ 0.17
ERCC1-201ENST00000013807 SDC3O75056 442 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 POP4O95707 220 aaKnown RBP16.14■□□□□ 0.17
ERCC1-201ENST00000013807 CSF2P04141 144 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 GP1BAP07359 652 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 TPM2P07951 284 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 EIF2S3P41091 472 aaKnown RBP16.14■□□□□ 0.17
ERCC1-201ENST00000013807 CLDN2P57739 230 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 HNRNPKP61978 463 aaKnown RBP eCLIP16.14■□□□□ 0.173e-6■■□□□ 11.9
ERCC1-201ENST00000013807 FZD2Q14332 565 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 POLD3Q15054 466 aaPredicted RBP16.14■□□□□ 0.17
ERCC1-201ENST00000013807 CDO1Q16878 200 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 INO80DQ53TQ3 878 aaPredicted RBP16.14■□□□□ 0.17
ERCC1-201ENST00000013807 CDCP2Q5VXM1 449 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 WDR59Q6PJI9 974 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 C3orf20Q8ND61 904 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 DENND6BQ8NEG7 585 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 CASKIN2Q8WXE0 1202 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 TBC1D31Q96DN5 1066 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 ARHGEF26Q96DR7 871 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 ERGIC2Q96RQ1 377 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 C11orf70Q9BRQ4 267 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 DUSP23Q9BVJ7 150 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 OSBPL1AQ9BXW6 950 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 MAGEB5Q9BZ81 275 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 NOL6Q9H6R4 1146 aaKnown RBP16.14■□□□□ 0.17
ERCC1-201ENST00000013807 NLRC4Q9NPP4 1024 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 ADAM22Q9P0K1 906 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 HPCAL4Q9UM19 191 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 MFHAS1Q9Y4C4 1052 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 ACTL7AQ9Y615 435 aa16.14■□□□□ 0.17
ERCC1-201ENST00000013807 LY6G6EA0A0G2JKS1 128 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 C16orf96A6NNT2 1141 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 WASH4PA8MWX3 477 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 AREL1O15033 823 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 RAMP2O60895 175 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 CALB1P05937 261 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 NME1P15531 152 aaKnown RBP16.13■□□□□ 0.17
ERCC1-201ENST00000013807 NSFP46459 744 aaKnown RBP16.13■□□□□ 0.17
ERCC1-201ENST00000013807 RABIFP47224 123 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 COPB1P53618 953 aaKnown RBP16.13■□□□□ 0.17
ERCC1-201ENST00000013807 AIF1P55008 147 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 CLDN6P56747 220 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 YBEYP58557 167 aaPredicted RBP16.13■□□□□ 0.17
ERCC1-201ENST00000013807 PFN3P60673 137 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 SNRPD1P62314 119 aaKnown RBP16.13■□□□□ 0.17
ERCC1-201ENST00000013807 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
ERCC1-201ENST00000013807 CLEC16AQ2KHT3 1053 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 MYLK3Q32MK0 819 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 HS1BP3Q53T59 392 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 MON1BQ7L1V2 547 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 SLFN11Q7Z7L1 901 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 CCDC185Q8N715 623 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 SNIP1Q8TAD8 396 aaKnown RBP16.13■□□□□ 0.17
ERCC1-201ENST00000013807 FAM172AQ8WUF8 416 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 CENPTQ96BT3 561 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 MYOCQ99972 504 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 CALN1Q9BXU9 219 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 DNAI1Q9UI46 699 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 U3KQA8 63 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 MGAQ8IWI9 3026 aa16.13■□□□□ 0.17
ERCC1-201ENST00000013807 FAM170AA1A519 330 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 LGALS16A8MUM7 142 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 TOR1BO14657 336 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 RAD51BO15315 384 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 SPINT1O43278 529 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 ALPPL2P10696 532 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 GPD1P21695 349 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 DNA2P51530 1060 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 ZNF143P52747 638 aaPredicted RBP16.12■□□□□ 0.17
ERCC1-201ENST00000013807 COL9A2Q14055 689 aaPredicted RBP16.12■□□□□ 0.17
ERCC1-201ENST00000013807 SYCP1Q15431 976 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 PPP1R15BQ5SWA1 713 aa16.12■□□□□ 0.17
ERCC1-201ENST00000013807 RWDD4Q6NW29 188 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms