RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 MFSD7Q6UXD7 560 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 FKBP9P1Q75LS8 142 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 GET4Q7L5D6 327 aaPredicted RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 KRT78Q8N1N4 520 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 RNF157Q96PX1 679 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TRIM4Q9C037 500 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TSPAN10Q9H1Z9 355 aaPredicted RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 NRDE2Q9H7Z3 1164 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 AURKCQ9UQB9 309 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TDRKHQ9Y2W6 561 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 HES2Q9Y543 173 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CAPN6Q9Y6Q1 641 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 C4BP0C0L5 1744 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TISP43B9A030 160 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 F8VP50 259 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TLR5O60602 858 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 GCATO75600 419 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 FGF1P05230 155 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CCNB1P14635 433 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SKIV2L2P42285 1042 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 CAPZA2P47755 286 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ZBTB17Q13105 803 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 POU6F1Q14863 301 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TEAD4Q15561 434 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 DDR2Q16832 855 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 PGS1Q32NB8 556 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ARSHQ5FYA8 562 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 MORN1Q5T089 497 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 DAB2IPQ5VWQ8 1189 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 KLHL35Q6PF15 583 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 LONP2Q86WA8 852 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 SIX5Q8N196 739 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 ALLCQ8N6M5 410 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 TUBGCP3Q96CW5 907 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 MED8Q96G25 268 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 PPP1R36Q96LQ0 422 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 FAM111AQ96PZ2 611 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 HNRNPABQ99729 332 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 ECSITQ9BQ95 431 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 CDC42EP4Q9H3Q1 356 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 ANLNQ9NQW6 1124 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 INTS7Q9NVH2 962 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 AGO1Q9UL18 857 aaKnown RBP4.3□□□□□ -1.72
CFTR-201ENST00000003084 BLOC1S6Q9UL45 172 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 PCDHGC5Q9Y5F6 944 aa4.3□□□□□ -1.72
CFTR-201ENST00000003084 RBM47A0AV96 593 aaKnown RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 SLC38A8A6NNN8 435 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 CATP04040 527 aaKnown RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 ASLP04424 464 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 PYGMP11217 842 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 TNNI3P19429 210 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 RPL3P39023 403 aaKnown RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 CD86P42081 329 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 BRCC3P46736 316 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 COPAP53621 1224 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 FMO1Q01740 532 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 GUCY1A3Q02108 690 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 OCA2Q04671 838 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 LRRC74AQ0VAA2 488 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 STXBP5Q5T5C0 1151 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 RAET1GQ6H3X3 334 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 PDE12Q6L8Q7 609 aaKnown RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 DOK6Q6PKX4 331 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 BEND7Q8N7W2 519 aaPredicted RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 APOPT1Q96IL0 206 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 SNRNP25Q9BV90 132 aaKnown RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 PRRG3Q9BZD7 231 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 GDF3Q9NR23 364 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 DUS2Q9NX74 493 aaKnown RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 C6orf203Q9P0P8 240 aaPredicted RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 INSL6Q9Y581 213 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 SQORQ9Y6N5 450 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 KDM3BQ7LBC6 1761 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 ARFGEF2Q9Y6D5 1785 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 E2F8A0AVK6 867 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 MYO1GB0I1T2 1018 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 ZSCAN9O15535 394 aaPredicted RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 SGTAO43765 313 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 AOC2O75106 756 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 PRNPP04156 253 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 SERPINE1P05121 402 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 ALADP13716 330 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 ENO3P13929 434 aaPredicted RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 HLA-DPA1P20036 260 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 FMO4P31512 558 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 ARHGAP1Q07960 439 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 DMTNQ08495 405 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 IRF5Q13568 498 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 INSCQ1MX18 579 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 ZC3H12BQ5HYM0 836 aaKnown RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 RD3Q7Z3Z2 195 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 OR5B17Q8NGF7 314 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 LNX1Q8TBB1 728 aaPredicted RBP4.29□□□□□ -1.72
CFTR-201ENST00000003084 CXorf40BQ96DE9 158 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 MYO19Q96H55 970 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 FUBP3Q96I24 572 aaKnown RBP eCLIP4.29□□□□□ -1.72
CFTR-201ENST00000003084 OLFM3Q96PB7 478 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 ACTR8Q9H981 624 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 LIN7BQ9HAP6 207 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 MIEF1Q9NQG6 463 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms