RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Hmgxb3G3X9M3 1254 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Gm11236J3QMS7 360 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Dpysl2O08553 572 aaKnown RBP18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 InvsO89019 1062 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Scd1P13516 355 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Znf148Q61624 794 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Exoc3l4Q6DIA2 721 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Gm5414Q6IFZ8 552 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Slc16a9Q7TM99 508 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Ankrd45Q810N6 248 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Znf385bQ8BXJ8 482 aaKnown RBP18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Mccc1Q99MR8 717 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Syap1Q9D5V6 365 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Spatc1lQ9D9W0 342 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Tmem240B2RWJ3 173 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Hcn3O88705 779 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Gdf6P43028 454 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Sox8Q04886 464 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Kcna4Q61423 654 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 DstykQ6XUX1 927 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Alkbh8Q80Y20 664 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Xylt1Q811B1 953 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Stx16Q8BVI5 326 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Anxa13Q99JG3 317 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 NamptQ99KQ4 491 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Dnajb4Q9D832 337 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Gpr45Q9EQQ4 373 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Homer2Q9QWW1 354 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Tagln3Q9R1Q8 199 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Shcbp1Q9Z179 668 aa18.54■□□□□ 0.56
Trim47-202ENSMUST00000106441 Cldn24D3YXJ9 220 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Gm3002E9PW72 216 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 FancfE9Q5Z5 343 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Axin1O35625 863 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Pbx2O35984 430 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Alas2P08680 587 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 MutP16332 748 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Zfy2P20662 777 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Yap1P46938 488 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Krt6aP50446 553 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 B3gat3P58158 335 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Atp6v1b2P62814 511 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 ThraP63058 492 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Zfp658Q5PPQ4 887 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 PostnQ62009 838 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Serpina12Q7TMF5 413 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Wdr59Q8C0M0 992 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 DenrQ9CQJ6 198 aaKnown RBP18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 GarsQ9CZD3 729 aaKnown RBP18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Nme3Q9WV85 169 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Ern2Q9Z2E3 911 aa18.53■□□□□ 0.56
Trim47-202ENSMUST00000106441 Ap2a1P17426 977 aaKnown RBP18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Cdo1P60334 200 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Gdf3Q07104 366 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Lag3Q61790 521 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Xpo1Q6P5F9 1071 aaKnown RBP18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Dnajb13Q80Y75 316 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Best2Q8BGM5 508 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 SybuQ8BHS8 665 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Prkaa2Q8BRK8 552 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Clptm1lQ8BXA5 539 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Rbm34Q8C5L7 375 aaKnown RBP18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Fam204aQ8C6C7 236 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Plbd1Q8VCI0 550 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Vangl2Q91ZD4 521 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Mrpl57Q9CQF8 102 aaKnown RBP18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Neurl2Q9D0S4 285 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Rin2Q9D684 903 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Ing2Q9ESK4 281 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 PigqQ9QYT7 581 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Cyp2b13A6H6J2 491 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 A630010A05RikA9C473 232 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Dnmt3cP0DOY1 709 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 UtyP79457 1212 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Tekt4Q149S1 447 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 MyrfQ3UR85 1138 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Fads6Q80UG1 342 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Msantd1Q8BIL2 278 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Mapkap1Q8BKH7 522 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Fra10ac1Q8BP78 315 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Amz1Q8BVF9 502 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Serpinb10Q8K1K6 397 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Ddx18Q8K363 660 aaKnown RBP18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Slc25a3Q8VEM8 357 aaKnown RBP18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Zcchc14Q8VIG0 956 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Pcdhb10Q91VE5 797 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 GatbQ99JT1 557 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Cox16Q9CR63 106 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Fgf22Q9ESS2 162 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Map3k6Q9WTR2 1291 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Cpxm1Q9Z100 722 aa18.52■□□□□ 0.56
Trim47-202ENSMUST00000106441 Rabgap1lA6H6A9 815 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Olfr220E9Q050 325 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Erich2E9Q1A6 463 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Ptar1E9QAB6 424 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 E230025N22RikG5E8S3 482 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Adam19O35674 920 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Cd3gP11942 182 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Hsd11b2P51661 386 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Kpna2P52293 529 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms