RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Rccd1Q8BTU7 377 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tceal1Q921P9 165 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cstf1Q99LC2 431 aaKnown RBP7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Polr3cQ9D483 533 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Nsmce1Q9D720 266 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 DpysQ9EQF5 519 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Thap11Q9JJD0 305 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 EmcnQ9R0H2 261 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Map3k14Q9WUL6 942 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 FscbA1EGX6 1074 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fam170bE9PXT9 378 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 ShdO88834 343 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gap43P06837 227 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cd44P15379 778 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ano9P86044 747 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Scrn3Q3TMH2 418 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rnf10Q3UIW5 804 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fam81aQ3UXZ6 364 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Vav2Q60992 868 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Hif1aQ61221 836 aaKnown RBP7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 CcnhQ61458 323 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Amer3Q6NS69 780 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Stambpl1Q76N33 436 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 SrlQ7TQ48 910 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 TufmQ8BFR5 452 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Elp6Q8BK75 266 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tma7Q8K003 64 aaKnown RBP7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Slf1Q8R3P9 1054 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Satb2Q8VI24 733 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rsph1Q8VIG3 301 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 NelfcdQ922L6 591 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cybrd1Q925G2 290 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Atoh8Q99NA2 322 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 BlvraQ9CY64 295 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Llcfc1Q9D9P8 108 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Jph2Q9ET78 696 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dach1Q9QYB2 751 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 GgcxQ9QYC7 757 aa7□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Scgb2b11A0A087WR49 112 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lzts3A2AHG0 700 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Serpina3jD3Z451 420 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm3460E9QAI8 215 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Vmn2r67K7N6T2 851 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 FynP39688 537 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 SftpbP50405 377 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mrps6P58064 125 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Sco1Q5SUC9 284 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tnfaip2Q61333 691 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Utp14bQ6EJB6 756 aaKnown RBP6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ppp2r2aQ6P1F6 447 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Slc39a10Q6P5F6 833 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ccnt2Q7TQK0 723 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Impg2Q80XH2 1243 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Tarsl2Q8BLY2 790 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Osbpl6Q8BXR9 959 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Trub1Q8C0D0 338 aaKnown RBP6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Wdr59Q8C0M0 992 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ccdc87Q8CDL9 855 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fam149aQ8CFV2 787 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Cdk17Q8K0D0 523 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Znf426Q8R1D1 550 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Zdhhc7Q91WU6 308 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lrp8Q924X6 996 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Armt1A6H630 439 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Adamtsl5D3Z689 485 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Glyatl3E9Q5L8 290 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 1700024B05RikE9Q6D7 167 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Vmn1r55E9Q8I6 310 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 XlrP05531 208 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ddr1Q03146 911 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 RnaselQ05921 735 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Bcl2a1cQ0P538 128 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Perm1Q149B8 807 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 HecaQ3V1N5 544 aaKnown RBP6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fam46cQ5SSF7 391 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Irak1Q62406 710 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Leng8Q8CBY3 785 aaKnown RBP6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Papd4Q91YI6 484 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 FdpsQ920E5 353 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 St13Q99L47 371 aaKnown RBP6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Trim12aQ99PQ1 284 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rnf138rt1Q9D9M9 248 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Q9DAR0 182 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Maged2Q9ER67 616 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rnf14Q9JI90 485 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 TprF6ZDS4 2431 aaKnown RBP6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Adcy1O88444 1118 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gna12P27600 379 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dsc1P55849 886 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ctps1P70698 591 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 NxnP97346 435 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mtf2Q02395 593 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Brms1lQ3U1T3 323 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gpr165Q3V3A3 455 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ppp1r14bQ62084 147 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 MyorgQ69ZQ1 716 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Phactr3Q8BYK5 558 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Actl9Q8CG27 415 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dact1Q8R4A3 778 aa6.99□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pcdha3Q91Y16 942 aa6.99□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms