RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Akr1c12Q9JLI0 323 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Olfr731F8VQB9 326 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cyp27b1O35084 507 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Il27raO70394 623 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pabpc1P29341 636 aaKnown RBP12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 DmpkP54265 631 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pkn1P70268 946 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Galnt3P70419 633 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zbtb2Q3V3W4 514 aaKnown RBP12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Usp17laQ61068 526 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Man1c1Q6NXK9 625 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Wdr91Q7TMQ7 748 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Trim17Q7TPM3 477 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rmnd5aQ80YQ8 391 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ago3Q8CJF9 860 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 HpgdQ8VCC1 269 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mark1Q8VHJ5 795 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Snx15Q91WE1 337 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ubxn6Q99PL6 442 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Osbpl10S4R1M9 766 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Sppl2cA2A6C4 690 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm379J3QQ19 296 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Vmn2r26Q6TAC4 855 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Smoc1Q8BLY1 463 aaKnown RBP12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm42417Q8K1D0 126 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cpne8Q9DC53 577 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 DpysQ9EQF5 519 aa12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Znf638Q61464 1960 aaKnown RBP12.01□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Clca3bE9PUL3 1044 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zfp882E9Q4R4 555 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 AgxtO35423 414 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 HexdcQ3U4H6 486 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ankrd42Q3V096 527 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fbxw11Q5SRY7 542 aaKnown RBP12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 GnasQ6R0H7 1133 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cops7bQ8BV13 264 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tbc1d16A2ABG4 766 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Nfkb1P25799 971 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Sephs2P97364 452 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Arhgap45Q3TBD2 1116 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Nr6a1Q64249 495 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cfap97Q6ZPR1 541 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Sytl5Q80T23 753 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Exoc3l1Q8BI71 739 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cgrrf1Q8BMJ7 332 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rev1Q920Q2 1249 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 LiasQ99M04 373 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 EmcnQ9R0H2 261 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Clcn5Q9WVD4 746 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 CpqQ9WVJ3 470 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Chek2Q9Z265 546 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Slc27a6E9Q9W4 619 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Vmn1r39G3UWE6 305 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 PigrO70570 771 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Adamts19P59509 1210 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Eri2Q5BKS4 688 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Slc39a13Q8BZH0 361 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Trappc5Q9CQA1 188 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Wars2Q9CYK1 360 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Sh2d4aQ9D7V1 421 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Vnn3Q9QZ25 500 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm3173A6NAS3 172 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Sec14l1A8Y5H7 715 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm3020E9Q3J7 150 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm2897K7N6T7 172 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Nos2P29477 1144 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 CenpcP49452 906 aaKnown RBP12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Lsg1Q3UM18 644 aaKnown RBP12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 PrkciQ62074 595 aaKnown RBP12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Egfl8Q6GUQ1 293 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cpsf4Q8BQZ5 211 aaKnown RBP12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tmc7Q8C428 726 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm3411Q8C7R2 150 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ppil6Q9D6D8 278 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Snx5Q9D8U8 404 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Galk1Q9R0N0 392 aa12□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Map7d3A2AEY4 876 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fam171a1A2ATK9 892 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Olfr742A2RTP5 311 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ccl26F8VQM2 93 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Calb2Q08331 271 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Nek10Q3UGM2 1111 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tcf4Q60722 670 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Olfr855Q7TRF8 312 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 ToporsQ80Z37 1033 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Lrrc66Q8K0B3 872 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fam151aQ8QZW3 608 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rnf146Q9CZW6 359 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 MrrfQ9D6S7 262 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Vps35Q9EQH3 796 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 C1qtnf1Q9QXP7 281 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Acp4D3YTS9 425 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm5814J3QP80 125 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Angpt2O35608 496 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 LipeP54310 759 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Irf7P70434 457 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ntrk1Q3UFB7 799 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Il17reQ8BH06 637 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Elmo1Q8BPU7 727 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Clip4Q8CI96 704 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms