RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Znf219Q6IQX8 726 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Sel1l3Q80TS8 1137 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Q80Y73 168 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Kcnv1Q8BZN2 503 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Adgrg3Q8R0T6 542 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 4921530L21RikQ9CQ47 274 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Them5Q9CQJ0 248 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Tma16Q9CR02 221 aaKnown RBP16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Agpat3Q9D517 376 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 P2yr13Q9D8I2 337 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Cd320Q9Z1P5 260 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Vmn2r11E9Q4X4 861 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 OgdhlE9Q7L0 1029 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Scd1P13516 355 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Pik3r6Q3U6Q4 756 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Abcd2Q61285 741 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Zfp512bQ6PHP4 879 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Slc7a4Q8BLQ7 635 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Nipal1Q8BMW7 416 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Tmem209Q8BRG8 561 aaKnown RBP16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 4933409G03RikQ8C5U0 320 aa16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Ruvbl2Q9WTM5 463 aaKnown RBP16.63■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm36028A0A0U1RPM1 299 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 4930469K13RikA0A286YDB2 92 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Vmn2r70K7N702 854 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm3164L7N2B9 238 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Cyp27b1O35084 507 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Lamp2P17047 415 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Ap2a2P17427 938 aaKnown RBP16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Fastkd5Q7TMV3 762 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Disc1Q811T9 852 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 PigxQ99LV7 254 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Echdc3Q9D7J9 300 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Trim54Q9ERP3 366 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Slfn9B1ARD6 910 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Cyp2j12G3UXT0 502 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 BC024978J3QPC3 361 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Atxn10P28658 475 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Gdf6P43028 454 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Il12bP43432 335 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 ThraP63058 492 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 NogP97466 232 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Tmed1Q3V009 227 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Tas2r115Q7M719 310 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Polr2eQ80UW8 210 aaKnown RBP16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Clec2eQ80XD9 204 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Adprhl2Q8CG72 370 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Prrg2Q8R182 198 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Mtmr14Q8VEL2 648 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Ssxb1Q9CPU1 170 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Copg1Q9QZE5 874 aa16.62■□□□□ 0.25
Shh-201ENSMUST00000002708 Skint1A7TZE6 364 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 4930426L09RikE9Q0N7 123 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Vmn2r14E9Q759 848 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 P01641 117 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Camk4P08414 469 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Eno3P21550 434 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Casp2P29594 452 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Vps4bP46467 444 aaKnown RBP16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Hrh2P97292 397 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Gabpb1Q00420 383 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Ptchd3Q0EEE2 906 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Spryd7Q3TFQ1 196 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Zfp217Q3U0X6 1041 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Fam35aQ3UEN2 891 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 P3h1Q3V1T4 739 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 LnpepQ8C129 1025 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Cabcoco1Q8CDT7 208 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Reep3Q99KK1 254 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Mrps18aQ99N85 196 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Tbc1d21Q9D9D3 336 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 MecrQ9DCS3 373 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Gm10717D3Z1I8 228 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Chrna4O70174 629 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Il6raP22272 460 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Mtf2Q02395 593 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Sorbs2Q3UTJ2 1180 aaKnown RBP16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Nqo1Q64669 274 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Olfr1415Q7TQS4 311 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Mapkap1Q8BKH7 522 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Tlk1Q8C0V0 766 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Cog4Q8R1U1 785 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Gsg1Q8R1W2 324 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Olfr1416Q8VGU4 312 aa16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 VapbQ9QY76 243 aaKnown RBP16.61■□□□□ 0.25
Shh-201ENSMUST00000002708 Vmn2r65G3X931 845 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Olfr603L7N1Y4 312 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Cxcl9P18340 126 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Gpr15Q0VDU3 360 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Znf865Q3U3I9 1058 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Vps51Q3UVL4 782 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Trim67Q505D9 768 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Olfr8Q60892 310 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Mtnr1aQ61184 353 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Avpr1aQ62463 423 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Dlx3Q64205 287 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Tbc1d12Q6A039 696 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 4933402J07RikQ8BHX0 270 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Rap2cQ8BU31 183 aa16.6■□□□□ 0.25
Shh-201ENSMUST00000002708 Tspan14Q8QZY6 270 aa16.6■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 109.6 ms