RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 H2AFVQ71UI9 128 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 ANKS1BQ7Z6G8 1248 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 FAM131BQ86XD5 332 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 SPATS2Q86XZ4 545 aaKnown RBP7.61□□□□□ -1.19
PHGDH-225ENST00000641720 DENND1CQ8IV53 801 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 CCDC170Q8IYT3 715 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 FAM172AQ8WUF8 416 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 CTNNBL1Q8WYA6 563 aaPredicted RBP7.61□□□□□ -1.19
PHGDH-225ENST00000641720 MYEOVQ96EZ4 313 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 BTBD6Q96KE9 485 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 EIF3CQ99613 913 aaKnown RBP7.61□□□□□ -1.19
PHGDH-225ENST00000641720 NUP85Q9BW27 656 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 KCNF1Q9H3M0 494 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 AGO1Q9UL18 857 aaKnown RBP7.61□□□□□ -1.19
PHGDH-225ENST00000641720 TLR6Q9Y2C9 796 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 SCINQ9Y6U3 715 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 U3KQA8 63 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 MED13Q9UHV7 2174 aa7.61□□□□□ -1.19
PHGDH-225ENST00000641720 DOPEY1Q5JWR5 2465 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 GOLGA6L7A0A1B0GV03 622 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CLEC18AA5D8T8 446 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CAPN8A6NHC0 703 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 KCNU1A8MYU2 1149 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 RRP8O43159 456 aaKnown RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 EPHX1P07099 455 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 JUPP14923 745 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 TCF4P15884 667 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 ACP1P24666 158 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 PSMA2P25787 234 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 SLC6A4P31645 630 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CYLC1P35663 651 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 HNF1BP35680 557 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CXCR3P49682 368 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 IRAK1P51617 712 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 SGSHP51688 502 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 HDAC4P56524 1084 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 COG7P83436 770 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 DEUP1Q05D60 604 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 ILKQ13418 452 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CCDC157Q569K6 752 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 FAM133BQ5BKY9 247 aaKnown RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 ARTNQ5T4W7 220 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 PIK3R6Q5UE93 754 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 KIAA0895LQ68EN5 471 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 DCUN1D2Q6PH85 259 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CLEC18BQ6UXF7 455 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 LRRC69Q6ZNQ3 347 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CYP4V2Q6ZWL3 525 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 LRRC8AQ8IWT6 810 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 ARFGAP1Q8N6T3 406 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CCDC185Q8N715 623 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CLEC18CQ8NCF0 446 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 ZNF564Q8TBZ8 553 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CENPIQ92674 756 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 PGAP3Q96FM1 320 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 PRR11Q96HE9 360 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 MRGPRX3Q96LB0 322 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 PRICKLE1Q96MT3 831 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 PEBP4Q96S96 227 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CNPY3Q9BT09 278 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 MTG2Q9H4K7 406 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 RRN3Q9NYV6 651 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 CTTNBP2NLQ9P2B4 639 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 TRIM10Q9UDY6 481 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 SALL4Q9UJQ4 1053 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 ANAPC7Q9UJX3 599 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 STOML2Q9UJZ1 356 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 LSM7Q9UK45 103 aaKnown RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 STAP1Q9ULZ2 295 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 PCDHA13Q9Y5I0 950 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 SNX10Q9Y5X0 201 aa7.6□□□□□ -1.19
PHGDH-225ENST00000641720 EPN1Q9Y6I3 576 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-225ENST00000641720 RP1L1Q8IWN7 2480 aaPredicted RBP7.59□□□□□ -1.19
PHGDH-225ENST00000641720 SHANK1Q9Y566 2161 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 TRIM38O00635 465 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 LATO43561 262 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 DFNA5O60443 496 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 ACSL4O60488 711 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 LRCH4O75427 683 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 PAGE1O75459 146 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 ENDOD1O94919 500 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 LDOC1O95751 146 aaPredicted RBP7.59□□□□□ -1.19
PHGDH-225ENST00000641720 APOEP02649 317 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 CDK4P11802 303 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 ITGB6P18564 788 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 CCR1P32246 355 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 MAGEA1P43355 309 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 HARS2P49590 506 aaKnown RBP7.59□□□□□ -1.19
PHGDH-225ENST00000641720 NXPH1P58417 271 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 ZBTB16Q05516 673 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 SPA17Q15506 151 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 TEAD4Q15561 434 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 COLEC12Q5KU26 742 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 NUGGCQ68CJ6 796 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 RFWD3Q6PCD5 774 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 IGF2-ASQ6U949 168 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 STRADAQ7RTN6 431 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 EID2Q8N6I1 236 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 EXD3Q8N9H8 876 aa7.59□□□□□ -1.19
PHGDH-225ENST00000641720 ZNF248Q8NDW4 579 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms