RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 HPS4Q9NQG7 708 aa10.47□□□□□ -0.73
PHGDH-224ENST00000641711 EIF2B3Q9NR50 452 aaKnown RBP10.47□□□□□ -0.73
PHGDH-224ENST00000641711 SPHK2Q9NRA0 654 aa10.47□□□□□ -0.73
PHGDH-224ENST00000641711 PIGVQ9NUD9 493 aa10.47□□□□□ -0.73
PHGDH-224ENST00000641711 NKIRAS1Q9NYS0 192 aa10.47□□□□□ -0.73
PHGDH-224ENST00000641711 SFMBT1Q9UHJ3 866 aa10.47□□□□□ -0.73
PHGDH-224ENST00000641711 FBXL21Q9UKT6 434 aa10.47□□□□□ -0.73
PHGDH-224ENST00000641711 WNT6Q9Y6F9 365 aa10.47□□□□□ -0.73
PHGDH-224ENST00000641711 POC1B-GALNT4F8VUJ3 575 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 GFRA2O00451 464 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 TRDMT1O14717 391 aaKnown RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 DCLK1O15075 740 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 NARSO43776 548 aaKnown RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 ACSL4O60488 711 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 OPHN1O60890 802 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 METTL18O95568 372 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 CYBBP04839 570 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 CYP17A1P05093 508 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 IRF1P10914 325 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 ADH5P11766 374 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 MLNP12872 115 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 STX2P32856 288 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 CTHP32929 405 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 ELK3P41970 407 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 MAGEA9P43362 315 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 STARD6P59095 220 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 NRG1Q02297 640 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 ITIH4Q14624 930 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 E2F5Q15329 346 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 DHCR24Q15392 516 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 ARL13BQ3SXY8 428 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 HP1BP3Q5SSJ5 553 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 RNF43Q68DV7 783 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 HEATR6Q6AI08 1181 aaKnown RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 RGS9BPQ6ZS82 235 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 TRIM67Q6ZTA4 783 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 RFX8Q6ZV50 586 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 CYS1Q717R9 158 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 BMP8AQ7Z5Y6 402 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 CAND1Q86VP6 1230 aaKnown RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 IGDCC3Q8IVU1 814 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 SRRM1Q8IYB3 904 aaKnown RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 LRRC34Q8IZ02 419 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 ADGRG2Q8IZP9 1017 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 CACNA2D3Q8IZS8 1091 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 PYROXD2Q8N2H3 581 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 CCDC110Q8TBZ0 833 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 MZB1Q8WU39 189 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 DCAKDQ8WVC6 231 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 HTR3CQ8WXA8 447 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 ALKBH8Q96BT7 664 aaKnown RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 MAGEB18Q96M61 343 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 HAPLN3Q96S86 360 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 FERMT1Q9BQL6 677 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 IER2Q9BTL4 223 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 MAGEB5Q9BZ81 275 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 TRABDQ9H4I3 376 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 XAB2Q9HCS7 855 aaKnown RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 KCNK9Q9NPC2 374 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 ARHGEF38Q9NXL2 777 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 TBK1Q9UHD2 729 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 AGO1Q9UL18 857 aaKnown RBP10.46□□□□□ -0.73
PHGDH-224ENST00000641711 PIAS3Q9Y6X2 628 aa10.46□□□□□ -0.73
PHGDH-224ENST00000641711 MYO18AQ92614 2054 aaKnown RBP10.46□□□□□ -0.74
PHGDH-224ENST00000641711 ZNF318Q5VUA4 2279 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 TCRBV9S1A1TA0A576 114 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 KCNU1A8MYU2 1149 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 MYO1CO00159 1063 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 EEF2KO00418 725 aaKnown RBP10.45□□□□□ -0.74
PHGDH-224ENST00000641711 PPP1R12AO14974 1030 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-224ENST00000641711 NCAM2O15394 837 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 TYROBPO43914 113 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 MFSD11O43934 449 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 CACNG3O60359 315 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 STK10O94804 968 aaKnown RBP10.45□□□□□ -0.74
PHGDH-224ENST00000641711 ASMTLO95671 621 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 PENKP01210 267 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-224ENST00000641711 C1QAP02745 245 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 KLKB1P03952 638 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 VAV1P15498 845 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 PRKCHP24723 683 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 HTR7P34969 479 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 MSH2P43246 934 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 NME3Q13232 169 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 MPPE1Q53F39 396 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 SLC44A4Q53GD3 710 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 ANKRD20A2Q5SQ80 823 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 ANKRD20A1Q5TYW2 823 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 ANKRD20A3Q5VUR7 823 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 ZNF852Q6ZMS4 543 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 NUDT18Q6ZVK8 323 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 ZNF534Q76KX8 674 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 DENND1CQ8IV53 801 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 CNPY4Q8N129 248 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 AGGF1Q8N302 714 aaeCLIP10.45□□□□□ -0.74
PHGDH-224ENST00000641711 TAB3Q8N5C8 712 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-224ENST00000641711 HJURPQ8NCD3 748 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-224ENST00000641711 CCDC197Q8NCU1 140 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 DYDC1Q8WWB3 177 aa10.45□□□□□ -0.74
PHGDH-224ENST00000641711 SLC44A1Q8WWI5 657 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms