RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 GSTA2P09210 222 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 HNRNPA1P09651 372 aaKnown RBP eCLIP9□□□□□ -0.97
PHGDH-219ENST00000641513 MLNP12872 115 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 DDX6P26196 483 aaKnown RBP eCLIP9□□□□□ -0.97
PHGDH-219ENST00000641513 HNRNPH1P31943 449 aaKnown RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 STX2P32856 288 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 MAXP61244 160 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 CRADDP78560 199 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 SLC7A9P82251 487 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 OLIG2Q13516 323 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 HNRNPDQ14103 355 aaKnown RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 EFTUD2Q15029 972 aaKnown RBP eCLIP9□□□□□ -0.975e-6■■■■■ 28.8
PHGDH-219ENST00000641513 RAB30Q15771 203 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 PCSK7Q16549 785 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 GALNTL6Q49A17 601 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 C5orf22Q49AR2 442 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 RNF219Q5W0B1 726 aaPredicted RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 NAPEPLDQ6IQ20 393 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 ZNF534Q76KX8 674 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 CHST9Q7L1S5 443 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 RTL10Q7L3V2 364 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 GRASPQ7Z6J2 395 aaPredicted RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 ADGRD2Q7Z7M1 963 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 BBS5Q8N3I7 341 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 MPP5Q8N3R9 675 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 CNTD1Q8N815 330 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 TDRD5Q8NAT2 981 aaKnown RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 LEMD2Q8NC56 503 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 SPATA22Q8NHS9 363 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 ZNF398Q8TD17 642 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 GDPD5Q8WTR4 605 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 LRRC39Q96DD0 335 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 TMA16Q96EY4 203 aaKnown RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 PPP1R2P1Q96PQ5 205 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 FCRL5Q96RD9 977 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 EBNA1BP2Q99848 306 aaKnown RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 TBL1YQ9BQ87 522 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 MLPHQ9BV36 600 aaPredicted RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 FICDQ9BVA6 458 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 SLC46A2Q9BY10 475 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 PBX4Q9BYU1 374 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 MAGEH1Q9H213 219 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 RABEP2Q9H5N1 569 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 IGFLR1Q9H665 355 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 RETREG1Q9H6L5 497 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 BFARQ9NZS9 450 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 PSMC3IPQ9P2W1 217 aaPredicted RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 DNMT3BQ9UBC3 853 aaKnown RBP9□□□□□ -0.97
PHGDH-219ENST00000641513 CTNNAL1Q9UBT7 734 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 PRKAG3Q9UGI9 489 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 RABGEF1Q9UJ41 708 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 HCFC2Q9Y5Z7 792 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 IKBKGQ9Y6K9 419 aa9□□□□□ -0.97
PHGDH-219ENST00000641513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 A0A0D9SEW6 157 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 ILVBLA1L0T0 632 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 CBX4O00257 560 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 CHUKO15111 745 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 ATP9BO43861 1147 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 PRAMEF11O60813 436 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 ATP5HO75947 161 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 ZWINTO95229 277 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 LUC7L3O95232 432 aaKnown RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 ASMTLO95671 621 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 MT-CYBP00156 380 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 IL1BP01584 269 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 CYBBP04839 570 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 TPH1P17752 444 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 PFKLP17858 780 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 GCAP28676 217 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 HOXA9P31269 272 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 CCR2P41597 374 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 MSH2P43246 934 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 NRIP1P48552 1158 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 GEMIN4P57678 1058 aaKnown RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 ZXDBP98169 803 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 SLC10A7Q0GE19 358 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 CDH18Q13634 790 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 LBRQ14739 615 aaKnown RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 TMCO4Q5TGY1 634 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 TPGS1Q6ZTW0 290 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 KDELC2Q7Z4H8 507 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 SPATA21Q7Z572 469 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 LINC00523Q86TU6 105 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 SETD3Q86TU7 594 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 BBS7Q8IWZ6 715 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 CTAGE3PQ8IX95 158 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 AGGF1Q8N302 714 aaeCLIP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 C12orf76Q8N812 135 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 ADAMTS19Q8TE59 1207 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 SH3RF2Q8TEC5 729 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 DENND1AQ8TEH3 1009 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 ING5Q8WYH8 240 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 SMG7Q92540 1137 aaKnown RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 OXNAD1Q96HP4 312 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 SIGLEC10Q96LC7 697 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 CYTH2Q99418 400 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 GORASP1Q9BQQ3 440 aa8.99□□□□□ -0.97
PHGDH-219ENST00000641513 WDR83Q9BRX9 315 aaKnown RBP8.99□□□□□ -0.97
PHGDH-219ENST00000641513 CINPQ9BW66 212 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms