RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 FATE1Q969F0 183 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 SPATA13Q96N96 652 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 FSD1LQ9BXM9 530 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 TM6SF2Q9BZW4 377 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 TBC1D17Q9HA65 648 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 HS3ST2Q9Y278 367 aa13.17□□□□□ -0.3
PHGDH-218ENST00000641491 CFAP54Q96N23 3096 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 FAM170BA6NMN3 283 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 PRRT4C9JH25 899 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 C1QTNF3-AMACRE9PGA6 284 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 FANCGO15287 622 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 RNF40O75150 1001 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 ANXA9O76027 345 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 SLU7O95391 586 aaKnown RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 KLF8O95600 359 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 GSRP00390 522 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 KRT14P02533 472 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 SERPINF2P08697 491 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 SRCP12931 536 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 CD72P21854 359 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 XPAP23025 273 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 PTPN3P26045 913 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 NTSR1P30989 418 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 FDFT1P37268 417 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 ADCY8P40145 1251 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 CTSOP43234 321 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 KCNJ1P48048 391 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 VPS41P49754 854 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 STK19P49842 368 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 SCNN1BP51168 640 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 BASP1P80723 227 aaKnown RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 TCF15Q12870 199 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 ZNF234Q14588 700 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 DLG2Q15700 870 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 CYP1B1Q16678 543 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 GAB4Q2WGN9 574 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 TEX44Q53QW1 395 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 TXNDC11Q6PKC3 985 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 KIAA0907Q7Z7F0 614 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 TP53INP2Q8IXH6 220 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 NDUFAF2Q8N183 169 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 ALLCQ8N6M5 410 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 LRRN4Q8WUT4 740 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 ISG20Q96AZ6 181 aaKnown RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 IFT43Q96FT9 208 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 PPP1R16AQ96I34 528 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 CEP41Q9BYV8 373 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 ATP13A3Q9H7F0 1226 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 FBRSQ9HAH7 460 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 LTB4R2Q9NPC1 389 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 CACNA2D2Q9NY47 1150 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 THAP10Q9P2Z0 257 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 INTS6Q9UL03 887 aaKnown RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
PHGDH-218ENST00000641491 OR51B4Q9Y5P0 310 aa13.16□□□□□ -0.3
PHGDH-218ENST00000641491 CACNA1AO00555 2505 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 C5orf60A6NFR6 353 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 FAM187AA6NFU0 413 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 PSMD3O43242 534 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 ALDH1A2O94788 518 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 HOXB2P14652 356 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 VAV1P15498 845 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 SERPINA4P29622 427 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 MAGEA9P43362 315 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 EPHB1P54762 984 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 GEMP55040 296 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 STARD6P59095 220 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 AP1S1P61966 158 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 BCL2L1Q07817 233 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 SLC10A7Q0GE19 358 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 CCDC15Q0P6D6 951 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 GPS1Q13098 491 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 CALCOCO2Q13137 446 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 SIX1Q15475 284 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 TRIP13Q15645 432 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 OASLQ15646 514 aaKnown RBP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 CARD16Q5EG05 197 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 RALGPS1Q5JS13 557 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 ANKRD20A2Q5SQ80 823 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 TEX35Q5T0J7 233 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 ANKRD20A1Q5TYW2 823 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 ANKRD20A3Q5VUR7 823 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 FAM46CQ5VWP2 391 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 EGFLAMQ63HQ2 1017 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 NAIF1Q69YI7 327 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 FSTL4Q6MZW2 842 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 ZNF572Q7Z3I7 529 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 BBOF1Q8ND07 529 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 OR2AP1Q8NGE2 309 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 RPLP0P6Q8NHW5 317 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 CCDC110Q8TBZ0 833 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 MAML1Q92585 1016 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 ALG14Q96F25 216 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 EXOC2Q96KP1 924 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 LMLNQ96KR4 655 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms