RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
SCARB2-223ENST00000640640 C5P01031 1676 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 PSMD12O00232 456 aaPredicted RBP17.77■□□□□ 0.44
SCARB2-223ENST00000640640 SMAD3P84022 425 aaKnown RBP17.77■□□□□ 0.44
SCARB2-223ENST00000640640 POU5F1Q01860 360 aaKnown RBP17.77■□□□□ 0.44
SCARB2-223ENST00000640640 DHFR2Q86XF0 187 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 PYROXD2Q8N2H3 581 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 MCOLN3Q8TDD5 553 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 OTULINQ96BN8 352 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.77■□□□□ 0.44
SCARB2-223ENST00000640640 MYBPHLA2RUH7 354 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 INPP4BO15327 924 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 SHOX2O60902 331 aaPredicted RBP17.77■□□□□ 0.44
SCARB2-223ENST00000640640 RNASEH1O60930 286 aaKnown RBP17.77■□□□□ 0.44
SCARB2-223ENST00000640640 OR56A5P0C7T3 313 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 OR1D2P34982 312 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 PKNOX1P55347 436 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 TAF10Q12962 218 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 STARD3Q14849 445 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 PTPRNQ16849 979 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 STXBP5Q5T5C0 1151 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 CENPLQ8N0S6 344 aaPredicted RBP17.77■□□□□ 0.44
SCARB2-223ENST00000640640 TLCD1Q96CP7 247 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 MCRS1Q96EZ8 462 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 NSMCE2Q96MF7 247 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 QKIQ96PU8 341 aaKnown RBP eCLIP17.77■□□□□ 0.444e-6■■□□□ 14.1
SCARB2-223ENST00000640640 RHOJQ9H4E5 214 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 TXNRD2Q9NNW7 524 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 DYRK1BQ9Y463 629 aa17.77■□□□□ 0.44
SCARB2-223ENST00000640640 F8W810 466 aa17.77■□□□□ 0.43
SCARB2-223ENST00000640640 FAM155BO75949 473 aa17.77■□□□□ 0.43
SCARB2-223ENST00000640640 POLR2LP62875 67 aaKnown RBP17.77■□□□□ 0.43
SCARB2-223ENST00000640640 DUSP4Q13115 394 aa17.77■□□□□ 0.43
SCARB2-223ENST00000640640 PPM1LQ5SGD2 360 aa17.77■□□□□ 0.43
SCARB2-223ENST00000640640 DCAF12L1Q5VU92 463 aa17.77■□□□□ 0.43
SCARB2-223ENST00000640640 PATL1Q86TB9 770 aaKnown RBP17.77■□□□□ 0.43
SCARB2-223ENST00000640640 PCDH19Q8TAB3 1148 aa17.77■□□□□ 0.43
SCARB2-223ENST00000640640 KCTD14Q9BQ13 255 aaPredicted RBP17.77■□□□□ 0.43
SCARB2-223ENST00000640640 MRPL57Q9BQC6 102 aaKnown RBP17.77■□□□□ 0.43
SCARB2-223ENST00000640640 RAP2CQ9Y3L5 183 aa17.77■□□□□ 0.43
SCARB2-223ENST00000640640 CYP2A7P20853 494 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 INTS6LQ5JSJ4 861 aaKnown RBP17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ADGRD1Q6QNK2 874 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ZDHHC24Q6UX98 284 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 CYP2R1Q6VVX0 501 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 C10orf107Q8IVU9 208 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 C7orf43Q8WVR3 580 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 HMGXB4Q9UGU5 601 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 PLLPQ9Y342 182 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 BPGMP07738 259 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 SAMD4BQ5PRF9 694 aaKnown RBP17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ARHGAP17Q68EM7 881 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 LRRC8DQ7L1W4 858 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 SEPHS2Q99611 448 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ASB8Q9H765 288 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 VPS45Q9NRW7 570 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 A0A1W2PQH9 124 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 KPNA3O00505 521 aaPredicted RBP17.76■□□□□ 0.43
SCARB2-223ENST00000640640 LRIG2O94898 1065 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 CPSF4O95639 269 aaKnown RBP17.76■□□□□ 0.43
SCARB2-223ENST00000640640 CFHP08603 1231 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 FCGR1AP12314 374 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 FASP25445 335 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ABL2P42684 1182 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 SERPINB10P48595 397 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 SLC5A3P53794 718 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 WASHC5Q12768 1159 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 MAD2L1Q13257 205 aaPredicted RBP17.76■□□□□ 0.43
SCARB2-223ENST00000640640 KCNA10Q16322 511 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 SYTL1Q8IYJ3 562 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 PCDH20Q8N6Y1 951 aaKnown RBP17.76■□□□□ 0.43
SCARB2-223ENST00000640640 CAB39LQ9H9S4 337 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 GIMAP4Q9NUV9 329 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ZMYM5Q9UJ78 669 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 C5orf60A6NFR6 353 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ENTPD5O75356 428 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 SEC22BO75396 215 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 LGR5O75473 907 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 PSMG1O95456 288 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 STAU1O95793 577 aaKnown RBP17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ATP6V1B2P21281 511 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 NOVP48745 357 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 NDUFV1P49821 464 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ERAP2Q6P179 960 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 PRMT9Q6P2P2 845 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 ZC3H3Q8IXZ2 948 aaKnown RBP17.76■□□□□ 0.43
SCARB2-223ENST00000640640 OR6Y1Q8NGX8 325 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 OPTCQ9UBM4 332 aa17.76■□□□□ 0.43
SCARB2-223ENST00000640640 E7ENQ6 273 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 LYPLA1O75608 230 aaPredicted RBP17.75■□□□□ 0.43
SCARB2-223ENST00000640640 DAB2P98082 770 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 SH3PXD2AQ5TCZ1 1133 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 ZFP1Q6P2D0 407 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 SLC44A2Q8IWA5 706 aaPredicted RBP17.75■□□□□ 0.43
SCARB2-223ENST00000640640 SPATA6LQ8N4H0 392 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 WDR41Q9HAD4 459 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 ZDHHC18Q9NUE0 388 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 NDUFA13Q9P0J0 144 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 LBPP18428 481 aa17.75■□□□□ 0.43
SCARB2-223ENST00000640640 TTPAP49638 278 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms