RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SLC11A1P49279 550 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 CTBP1Q13363 440 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 HNRNPDQ14103 355 aaKnown RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 USP10Q14694 798 aaKnown RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 TRIP4Q15650 581 aaPredicted RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 RAP1GAP2Q684P5 730 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 OR6Y1Q8NGX8 325 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 PTCD2Q8WV60 388 aaKnown RBP21.81■■□□□ 1.08
CLN6-224ENST00000638076 IGSF8Q969P0 613 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 BTN2A3PQ96KV6 586 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 SLC25A51Q9H1U9 297 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 NT5MQ9NPB1 228 aa21.81■■□□□ 1.08
CLN6-224ENST00000638076 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.8■■□□□ 1.08
CLN6-224ENST00000638076 NT5C1B-RDH14C9J2C7 533 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 GM2AP17900 193 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 ARNTP27540 789 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 CPA2P48052 419 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 HARS2P49590 506 aaKnown RBP21.8■■□□□ 1.08
CLN6-224ENST00000638076 CSRP3P50461 194 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 RENBPP51606 427 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 PGGT1BP53609 377 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 WNT3AP56704 352 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 MPP1Q00013 466 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 CNGA3Q16281 694 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 FBXL22Q6P050 247 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 RNF19BQ6ZMZ0 732 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 KLHL5Q96PQ7 755 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 CCDC106Q9BWC9 280 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 OLA1Q9NTK5 396 aaKnown RBP21.8■■□□□ 1.08
CLN6-224ENST00000638076 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.8■■□□□ 1.08
CLN6-224ENST00000638076 TLK1Q9UKI8 766 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 VGLL3A8MV65 326 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 PHGDHO43175 533 aaKnown RBP21.8■■□□□ 1.08
CLN6-224ENST00000638076 PBX3P40426 434 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 MAXP61244 160 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 ITKQ08881 620 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 SLC10A7Q0GE19 358 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 SEPT6Q14141 434 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 RCN2Q14257 317 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 DEFB115Q30KQ5 88 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 FUT10Q6P4F1 479 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 ZNF354CQ86Y25 554 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 SLC25A41Q8N5S1 370 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 PABPC5Q96DU9 382 aaKnown RBP21.8■■□□□ 1.08
CLN6-224ENST00000638076 DENND2DQ9H6A0 471 aaPredicted RBP21.8■■□□□ 1.08
CLN6-224ENST00000638076 MRM3Q9HC36 420 aaKnown RBP21.8■■□□□ 1.08
CLN6-224ENST00000638076 CREBZFQ9NS37 354 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 CPSF2Q9P2I0 782 aaKnown RBP21.8■■□□□ 1.08
CLN6-224ENST00000638076 LRFN2Q9ULH4 789 aa21.8■■□□□ 1.08
CLN6-224ENST00000638076 IGLV3-10A0A075B6K4 115 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 SLC12A8A0AV02 714 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 VNN2O95498 520 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 PSEN1P49768 467 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 GPR17Q13304 367 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 UGP2Q16851 508 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 RTP2Q5QGT7 225 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 MARC1Q5VT66 337 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 KDELC1Q6UW63 502 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 MAVSQ7Z434 540 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 SPPL2BQ8TCT7 592 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 STN1Q9H668 368 aaKnown RBP21.79■■□□□ 1.08
CLN6-224ENST00000638076 GPBP1L1Q9HC44 474 aaPredicted RBP21.79■■□□□ 1.08
CLN6-224ENST00000638076 TREX1Q9NSU2 369 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 DONSONQ9NYP3 566 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 PEX11AO75192 247 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 ANP32DO95626 131 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 AVPR1AP37288 418 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 TUBB3Q13509 450 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 WASHC2DQ5SRD0 308 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 RFWD3Q6PCD5 774 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 NAPRTQ6XQN6 538 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 SLC41A1Q8IVJ1 513 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 TEX9Q8N6V9 391 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 PSMG2Q969U7 264 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 MCUR1Q96AQ8 359 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 C1QTNF1Q9BXJ1 281 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 TASP1Q9H6P5 420 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 EBF2Q9HAK2 575 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 SP110Q9HB58 689 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 ANKRD6Q9Y2G4 727 aa21.79■■□□□ 1.08
CLN6-224ENST00000638076 FNDC1Q4ZHG4 1894 aaPredicted RBP21.79■■□□□ 1.08
CLN6-224ENST00000638076 PRR5-ARHGAP8B1AHC4 643 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 PAMP19021 973 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 ARHGAP8P85298 464 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 BFSP2Q13515 415 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 UBAP2LQ14157 1087 aaKnown RBP21.78■■□□□ 1.08
CLN6-224ENST00000638076 ACCSLQ4AC99 568 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 REM2Q8IYK8 340 aaPredicted RBP21.78■■□□□ 1.08
CLN6-224ENST00000638076 IMP4Q96G21 291 aaKnown RBP21.78■■□□□ 1.08
CLN6-224ENST00000638076 NOP53Q9NZM5 478 aaKnown RBP21.78■■□□□ 1.08
CLN6-224ENST00000638076 RPL26L1Q9UNX3 145 aaKnown RBP21.78■■□□□ 1.08
CLN6-224ENST00000638076 PHF24Q9UPV7 400 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 APOBEC2Q9Y235 224 aaKnown RBP21.78■■□□□ 1.08
CLN6-224ENST00000638076 PCDHB12Q9Y5F1 795 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.78■■□□□ 1.08
CLN6-224ENST00000638076 KIF3CO14782 793 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 SLC35E2BP0CK96 405 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 CD86P42081 329 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 SLC1A2P43004 574 aa21.78■■□□□ 1.08
CLN6-224ENST00000638076 KDSRQ06136 332 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms