RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 USP17L18D6R9N7 530 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 USP17L22D6RA61 530 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 USP17L17D6RBQ6 530 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 USP17L19D6RCP7 530 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 USP17L20D6RJB6 530 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 USP17L24Q0WX57 530 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 USP17L6PQ6QN14 398 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 MILR1Q7Z6M3 343 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 RNPEPL1Q9HAU8 725 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 LY9Q9HBG7 655 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 DAGLAQ9Y4D2 1042 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 TKFCQ3LXA3 575 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 CDKL4Q5MAI5 379 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 PHF12Q96QT6 1004 aa19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 ATXN2Q99700 1313 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-257ENST00000638009 ATG9AQ7Z3C6 839 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 AMIGO1Q86WK6 493 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 BHLHE22Q8NFJ8 381 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 MCFD2Q8NI22 146 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 TBATAQ96M53 351 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 RPL26L1Q9UNX3 145 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 TMBIM6P55061 237 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 NRF1Q16656 503 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 ALG10Q5BKT4 473 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 BPIFB6Q8NFQ5 453 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 CPNE2Q96FN4 548 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 XKRYO14609 159 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 OR8H1Q8NGG4 311 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 FBXO32Q969P5 355 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 WRNIP1Q96S55 665 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 NOL11Q9H8H0 719 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 UGT2B11O75310 529 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 CRKLP46109 303 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 RIOK2Q9BVS4 552 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 GGA2Q9UJY4 613 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 TRHDEQ9UKU6 1024 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 LOXHD1Q8IVV2 1947 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 SLC7A2P52569 658 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 CHST15Q7LFX5 561 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 TMEM17Q86X19 198 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 NKX2-3Q8TAU0 364 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 COLEC11Q9BWP8 271 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 ALG5Q9Y673 324 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 CCNYL3P0C7X3 344 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 SQLEQ14534 574 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 TRMT11Q7Z4G4 463 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 KCNMB4Q86W47 210 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 OR10H2O60403 315 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 AXLP30530 894 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 PTPAQ15257 358 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 LHFPL3Q86UP9 236 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 LPCAT1Q8NF37 534 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 LGR6Q9HBX8 967 aa19.55■□□□□ 0.72
CACNA1A-257ENST00000638009 CCNT2O60583 730 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 HMBSP08397 361 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 CDK16Q00536 496 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 FAM76BQ5HYJ3 339 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 RTL4Q6ZR62 310 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 OR2L3Q8NG85 312 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 EPS8L3Q8TE67 593 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 MAFFQ9ULX9 164 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 C2CD2Q9Y426 696 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 PNMA5Q96PV4 448 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 FAM126AQ9BYI3 521 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 METP08581 1390 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 M0QYT0 321 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 PVALBP20472 110 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 ATP4AP20648 1035 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 MTMR10Q9NXD2 777 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 FCHO1O14526 889 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 LHX1P48742 406 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 ACOT2P49753 483 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 POU5F1Q01860 360 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 SETMARQ53H47 684 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 METTL8Q9H825 291 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 TLR8Q9NR97 1041 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 ARHGAP36Q6ZRI8 547 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 VPS28Q9UK41 221 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 DNPEPQ9ULA0 475 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 PCDHGB5Q9Y5G0 923 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 ARL5CA6NH57 179 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 MAGEC1O60732 1142 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 DYNLL1P63167 89 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 ZNF398Q8TD17 642 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 IL22Q9GZX6 179 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 ANKDD1BA6NHY2 528 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 B8ZZF3 427 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 GTPBP1O00178 669 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 PPP3R1P63098 170 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 NECTIN1Q15223 517 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 RASAL3Q86YV0 1011 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 NELL1Q92832 810 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 RDH8Q9NYR8 311 aa19.54■□□□□ 0.72
CACNA1A-257ENST00000638009 ALDH8A1Q9H2A2 487 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-257ENST00000638009 PRMT5O14744 637 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-257ENST00000638009 CRATP43155 626 aa19.53■□□□□ 0.72
CACNA1A-257ENST00000638009 CUL2Q13617 745 aa19.53■□□□□ 0.72
CACNA1A-257ENST00000638009 MED22Q15528 200 aa19.53■□□□□ 0.72
CACNA1A-257ENST00000638009 CHP1Q99653 195 aa19.53■□□□□ 0.72
CACNA1A-257ENST00000638009 CELF4Q9BZC1 486 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms