RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 INTS7Q9NVH2 962 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 B3GNT2Q9NY97 397 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 CYB5R1Q9UHQ9 305 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 SLC27A5Q9Y2P5 690 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 NR2E1Q9Y466 385 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 HSPB11Q9Y547 144 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 PTPRMP28827 1452 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 GLI2P10070 1586 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 LOC102724428A0A0B4J2F2 783 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 TFECO14948 347 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 NUPL2O15504 423 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 TNNC2P02585 160 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 TNNI1P19237 187 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 GLDCP23378 1020 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 SOX6P35712 828 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 ALDH7A1P49419 539 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 RCAN1P53805 252 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 PTPN5P54829 565 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 PKNOX1P55347 436 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 SIK1P57059 783 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 LSM3P62310 102 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 BST1Q10588 318 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 KCNH2Q12809 1159 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 EPS8Q12929 822 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 GPS1Q13098 491 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 SNTA1Q13424 505 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 IKBKEQ14164 716 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 VPS72Q15906 364 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 SSX2Q16385 188 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 MROH9Q5TGP6 573 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 ARCQ7LC44 396 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 ZNF654Q8IZM8 581 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 RNF148Q8N7C7 305 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 TRPV3Q8NET8 790 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 DENND1AQ8TEH3 1009 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 TRIM43Q96BQ3 446 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 ZHX1-C8orf76Q96EF9 292 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 ZDHHC12Q96GR4 267 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 PRR11Q96HE9 360 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 FBXL18Q96ME1 805 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 CINPQ9BW66 212 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 BBS2Q9BXC9 721 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 PUS7LQ9H0K6 701 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 DHX33Q9H6R0 707 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 SLC52A2Q9HAB3 445 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 RAVER2Q9HCJ3 691 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 STARD7Q9NQZ5 370 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 CYP26B1Q9NR63 512 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 KCNH7Q9NS40 1196 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 TRMT13Q9NUP7 481 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 RDH8Q9NYR8 311 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 MAD2L2Q9UI95 211 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 ACSL5Q9ULC5 683 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 ING4Q9UNL4 249 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 HMX3A6NHT5 357 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 F8W036 122 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 LAD1O00515 517 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 KCNQ3O43525 872 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 MAFO75444 373 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 PIGNO95427 931 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 WDPCPO95876 746 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 DLDP09622 509 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 UCHL3P15374 230 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 ATP2B4P23634 1241 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 FASP25445 335 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 BMPR1AP36894 532 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 YAP1P46937 504 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 CDKL1Q00532 357 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 LRRC41Q15345 812 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 TXNDC11Q6PKC3 985 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 CHERPQ8IWX8 916 aaKnown RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 TBC1D21Q8IYX1 336 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 ZNF496Q96IT1 587 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-216ENST00000637968 CD320Q9NPF0 282 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 FETUBQ9UGM5 382 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 PLA2G4CQ9UP65 541 aa5.81□□□□□ -1.48
SCN1A-216ENST00000637968 CDC42BPBQ9Y5S2 1711 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 SGK1O00141 431 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 DCXO43602 365 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 PRDM1O75626 825 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 UPK1BO75841 260 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 CCNDBP1O95273 360 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 IFNA7P01567 189 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 AKR1B1P15121 316 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 COMTP21964 271 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 TGM1P22735 817 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 CAPGP40121 348 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 HNF4AP41235 474 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 MCAMP43121 646 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 CAPZA1P52907 286 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 GPLD1P80108 840 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 KRT77Q7Z794 578 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 COMMD7Q86VX2 200 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 MIB1Q86YT6 1006 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 LACC1Q8IV20 430 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 CPA6Q8N4T0 437 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 IPCEF1Q8WWN9 437 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-216ENST00000637968 CELF1Q92879 486 aaKnown RBP5.8□□□□□ -1.48
SCN1A-216ENST00000637968 HDAC11Q96DB2 347 aa5.8□□□□□ -1.48
SCN1A-216ENST00000637968 PRRG3Q9BZD7 231 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms