RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SYN2Q92777 582 aaPredicted RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 RNF34Q969K3 372 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 FUBP1Q96AE4 644 aaKnown RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 NSMCE3Q96MG7 304 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 NOX5Q96PH1 765 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 SPAG5Q96R06 1193 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 HAPLN3Q96S86 360 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 TRIM7Q9C029 511 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 TNKS2Q9H2K2 1166 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 SLC32A1Q9H598 525 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 RRN3Q9NYV6 651 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 MYO1AQ9UBC5 1043 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 SLC12A6Q9UHW9 1150 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 VPS28Q9UK41 221 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 PCDHGB2Q9Y5G2 931 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 EPN1Q9Y6I3 576 aaPredicted RBP8.02□□□□□ -1.13
PNKP-229ENST00000637897 TRPM6Q9BX84 2022 aa8.02□□□□□ -1.13
PNKP-229ENST00000637897 SMG1Q96Q15 3661 aaKnown RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 ILVBLA1L0T0 632 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 TYW5A2RUC4 315 aaKnown RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 KIF5CO60282 957 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 PCDHGA12O60330 932 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 SRGAP2O75044 1071 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 LRIG2O94898 1065 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 NDUFA10O95299 355 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 MOCS3O95396 460 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 ADH1BP00325 375 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 F9P00740 461 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 RHOCP08134 193 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 MAT2AP31153 395 aaKnown RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 SULT2A1Q06520 285 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 ACAP1Q15027 740 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 CDO1Q16878 200 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 ZNF284Q2VY69 593 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 C22orf39Q6P5X5 142 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 CCNI2Q6ZMN8 369 aaPredicted RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 ZNF662Q6ZS27 426 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 SND1Q7KZF4 910 aaKnown RBP eCLIP8.01□□□□□ -1.13
PNKP-229ENST00000637897 SETD3Q86TU7 594 aaPredicted RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 ZNF677Q86XU0 584 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 PHF13Q86YI8 300 aaPredicted RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 TXLNBQ8N3L3 684 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 DCAF4L2Q8NA75 395 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 KLK6Q92876 244 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 OMDQ99983 421 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 DESI2Q9BSY9 194 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 SYNCQ9H7C4 482 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 GPR27Q9NS67 375 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 PPARGC1AQ9UBK2 798 aaKnown RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 DNAI1Q9UI46 699 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 GGT7Q9UJ14 662 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 PNMA8BQ9ULN7 279 aaPredicted RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 STAP1Q9ULZ2 295 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 FCF1Q9Y324 198 aaKnown RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 DAAM1Q9Y4D1 1078 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 ANKRD11Q6UB99 2663 aaPredicted RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 TDRD6O60522 2096 aaKnown RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 COL5A1P20908 1838 aaPredicted RBP8.01□□□□□ -1.13
PNKP-229ENST00000637897 ASXL3Q9C0F0 2248 aa8.01□□□□□ -1.13
PNKP-229ENST00000637897 DSPP15924 2871 aaKnown RBP8□□□□□ -1.13
PNKP-229ENST00000637897 COL27A1Q8IZC6 1860 aaPredicted RBP8□□□□□ -1.13
PNKP-229ENST00000637897 SIGLEC16A6NMB1 481 aa8□□□□□ -1.13
PNKP-229ENST00000637897 SRRM3A6NNA2 597 aaPredicted RBP8□□□□□ -1.13
PNKP-229ENST00000637897 EIF3CLB5ME19 914 aaKnown RBP8□□□□□ -1.13
PNKP-229ENST00000637897 ALOX15BO15296 676 aa8□□□□□ -1.13
PNKP-229ENST00000637897 RAD51BO15315 384 aa8□□□□□ -1.13
PNKP-229ENST00000637897 CTIFO43310 598 aaKnown RBP8□□□□□ -1.13
PNKP-229ENST00000637897 BNIP3LO60238 219 aa8□□□□□ -1.13
PNKP-229ENST00000637897 LEFTY1O75610 366 aa8□□□□□ -1.13
PNKP-229ENST00000637897 CER1O95813 267 aa8□□□□□ -1.13
PNKP-229ENST00000637897 PRLRP16471 622 aa8□□□□□ -1.13
PNKP-229ENST00000637897 ITIH2P19823 946 aa8□□□□□ -1.13
PNKP-229ENST00000637897 CD38P28907 300 aa8□□□□□ -1.13
PNKP-229ENST00000637897 OR1E1P30953 314 aa8□□□□□ -1.13
PNKP-229ENST00000637897 CASQ1P31415 396 aa8□□□□□ -1.13
PNKP-229ENST00000637897 CHRNA3P32297 505 aa8□□□□□ -1.13
PNKP-229ENST00000637897 STAT1P42224 750 aa8□□□□□ -1.13
PNKP-229ENST00000637897 ABL2P42684 1182 aa8□□□□□ -1.13
PNKP-229ENST00000637897 PTPN9P43378 593 aa8□□□□□ -1.13
PNKP-229ENST00000637897 SERPINH1P50454 418 aaKnown RBP8□□□□□ -1.13
PNKP-229ENST00000637897 GNG11P61952 73 aa8□□□□□ -1.13
PNKP-229ENST00000637897 GNA12Q03113 381 aa8□□□□□ -1.13
PNKP-229ENST00000637897 SCAPQ12770 1279 aa8□□□□□ -1.13
PNKP-229ENST00000637897 DNAJC3Q13217 504 aa8□□□□□ -1.13
PNKP-229ENST00000637897 TUBB2AQ13885 445 aa8□□□□□ -1.13
PNKP-229ENST00000637897 CA9Q16790 459 aa8□□□□□ -1.13
PNKP-229ENST00000637897 ACCSLQ4AC99 568 aa8□□□□□ -1.13
PNKP-229ENST00000637897 TMEM259Q4ZIN3 620 aa8□□□□□ -1.13
PNKP-229ENST00000637897 ARSIQ5FYB1 569 aa8□□□□□ -1.13
PNKP-229ENST00000637897 SFMBT2Q5VUG0 894 aa8□□□□□ -1.13
PNKP-229ENST00000637897 SEL1L3Q68CR1 1132 aa8□□□□□ -1.13
PNKP-229ENST00000637897 IL27RAQ6UWB1 636 aa8□□□□□ -1.13
PNKP-229ENST00000637897 LEKR1Q6ZMV7 388 aa8□□□□□ -1.13
PNKP-229ENST00000637897 GCNT7Q6ZNI0 430 aa8□□□□□ -1.13
PNKP-229ENST00000637897 TRIM69Q86WT6 500 aa8□□□□□ -1.13
PNKP-229ENST00000637897 TP53INP2Q8IXH6 220 aa8□□□□□ -1.13
PNKP-229ENST00000637897 SLC22A18ASQ8N1D0 253 aa8□□□□□ -1.13
PNKP-229ENST00000637897 ATP11CQ8NB49 1132 aa8□□□□□ -1.13
PNKP-229ENST00000637897 TMIEQ8NEW7 156 aa8□□□□□ -1.13
PNKP-229ENST00000637897 RHBDD1Q8TEB9 315 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms