RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 CDH5P33151 784 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 SCNN1AP37088 669 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 GABRB2P47870 512 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 LSSP48449 732 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 SULT1E1P49888 294 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 SERPINH1P50454 418 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 NEK3P51956 506 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 PCBP4P57723 403 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 SNX16P57768 344 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 RNASE9P60153 205 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 ERVPABLB-1P60509 514 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 HNRNPKP61978 463 aaKnown RBP eCLIP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 RPS21P63220 83 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 ARF5P84085 180 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 DEUP1Q05D60 604 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 SLC25A52Q3SY17 297 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 TPRG1LQ5T0D9 272 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 TRNP1Q6NT89 227 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 PTAR1Q7Z6K3 402 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 DCP2Q8IU60 420 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 FAM71AQ8IYT1 594 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 ZNF548Q8NEK5 533 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 FAM174AQ8TBP5 190 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 NAF1Q96HR8 494 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 PPP1R16AQ96I34 528 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 KLF6Q99612 283 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 DUSP23Q9BVJ7 150 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 SLC17A9Q9BYT1 436 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 CEP44Q9C0F1 390 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 SYNCQ9H7C4 482 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 USP29Q9HBJ7 922 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 DNAJC28Q9NX36 388 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 DNAJC12Q9UKB3 198 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 STAP1Q9ULZ2 295 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 ACTL7AQ9Y615 435 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 ERVH48-1M5A8F1 160 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 SPINT1O43278 529 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 AP1G1O43747 822 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 F9P00740 461 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 L1CAMP32004 1257 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 FLT3P36888 993 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 ACBD5Q5T8D3 534 aaPredicted RBP12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 KIAA1161Q6NSJ0 714 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 LRRC31Q6UY01 552 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 ZNF783Q6ZMS7 281 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 PARS2Q7L3T8 475 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 PARGQ86W56 976 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 XYLT1Q86Y38 959 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 LSMEM2Q8N112 164 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 PCDH20Q8N6Y1 951 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 IFI44Q8TCB0 444 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 LENG8Q96PV6 779 aaPredicted RBP12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 HAPLN3Q96S86 360 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 HEPHQ9BQS7 1158 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 SPON2Q9BUD6 331 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 C1QTNF2Q9BXJ5 285 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 OSBPL2Q9H1P3 480 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 POLR1BQ9H9Y6 1135 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 CPNE5Q9HCH3 593 aa12.37□□□□□ -0.43
CACNA1A-250ENST00000637809 SRGAP2O75044 1071 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 TGM2P21980 687 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 RECQLP46063 649 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 RABIFP47224 123 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 DUSP3P51452 185 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 CCNHP51946 323 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 TMPRSS3P57727 454 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 PFN3P60673 137 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 SKOR1P84550 965 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 GNA12Q03113 381 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 CFHR1Q03591 330 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 SLC20A2Q08357 652 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 ISXQ2M1V0 245 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 CARD16Q5EG05 197 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 FAM102AQ5T9C2 384 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 RETSATQ6NUM9 610 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 ZCCHC8Q6NZY4 707 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 GUSBP11Q6P575 273 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 IGF2-ASQ6U949 168 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 ZNF605Q86T29 641 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 CREBRFQ8IUR6 639 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 TMEM35BQ8NCS4 154 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 MAPK15Q8TD08 544 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 SNRNP27Q8WVK2 155 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 PRR11Q96HE9 360 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 FEM1CQ96JP0 617 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 ATP13A1Q9HD20 1204 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 TMEM59LQ9UK28 342 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 FCF1Q9Y324 198 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 PAXBP1Q9Y5B6 917 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 CSNK1G3Q9Y6M4 447 aa12.36□□□□□ -0.43
CACNA1A-250ENST00000637809 MYLKQ15746 1914 aa12.35□□□□□ -0.43
CACNA1A-250ENST00000637809 BOD1L1Q8NFC6 3051 aa12.35□□□□□ -0.43
CACNA1A-250ENST00000637809 FAM170AA1A519 330 aa12.35□□□□□ -0.43
CACNA1A-250ENST00000637809 EME2A4GXA9 379 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-250ENST00000637809 IGLON5A6NGN9 336 aa12.35□□□□□ -0.43
CACNA1A-250ENST00000637809 CASC3O15234 703 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-250ENST00000637809 CYP11B1P15538 503 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms