RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PCMTD2Q9NV79 361 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 PSD3Q9NYI0 1048 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 TAS2R13Q9NYV9 303 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 SFMBT1Q9UHJ3 866 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 MRPS17Q9Y2R5 130 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 PCDHGA11Q9Y5H2 935 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 ATRXP46100 2492 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 TCHHQ07283 1943 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 A0A1W2PRU2 124 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 TMEM120BA0PK00 339 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 TRPC5OSA6NMA1 111 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 ZNF839A8K0R7 811 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 SPECC1L-ADORA2AF8WAN1 911 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 LATS1O95835 1130 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 CALCAP01258 141 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 APODP05090 189 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 NCF2P19878 526 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 MZF1P28698 734 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 MAPK9P45984 424 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 POLD2P49005 469 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 GDF10P55107 478 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 GSCP56915 257 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 CDK18Q07002 472 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 IFT88Q13099 833 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 HIST2H2ACQ16777 129 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 TJAP1Q5JTD0 557 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 SDHAF4Q5VUM1 108 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 HIST2H2AA3Q6FI13 130 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 GRAMD4Q6IC98 578 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 DESI1Q6ICB0 168 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 FBXL19Q6PCT2 694 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 BRICD5Q6PL45 260 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 KDM7AQ6ZMT4 941 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 TPGS1Q6ZTW0 290 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 SIX5Q8N196 739 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 ACMSDQ8TDX5 336 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 OR8D1Q8WZ84 308 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 N4BP2L2Q92802 583 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 TIFAQ96CG3 184 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 ASB2Q96Q27 587 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 FUT8Q9BYC5 575 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 RABEP2Q9H5N1 569 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 ETNK1Q9HBU6 452 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 TMBIM4Q9HC24 238 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 GLOD4Q9HC38 313 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 EIF2B3Q9NR50 452 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 EVA1BQ9NVM1 165 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 HSFX1Q9UBD0 423 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 EGFL7Q9UHF1 273 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 AGO1Q9UL18 857 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 OGDHLQ9ULD0 1010 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 COG5Q9UP83 839 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 A0A0G2JND7 137 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 MTMR11A4FU01 709 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 YJEFN3A6XGL0 299 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 E7ENQ6 273 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 MATN3O15232 486 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 GCATO75600 419 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 PIK3CGP48736 1102 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 TTPAP49638 278 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 TPD52P55327 224 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 RING1Q06587 406 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 C21orf62-AS1Q17RA5 79 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 MROH9Q5TGP6 573 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 AFTPHQ6ULP2 937 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 PRSS55Q6UWB4 352 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 OLFML1Q6UWY5 402 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 NLRP14Q86W24 1093 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 GIMAP7Q8NHV1 300 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 KLHL29Q96CT2 875 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 P2RY11Q96G91 374 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 FAM84AQ96KN4 292 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 ZMAT2Q96NC0 199 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 CDCA3Q99618 268 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 ELAC2Q9BQ52 826 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 SIKE1Q9BRV8 207 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 NMRAL1Q9HBL8 299 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 ZDHHC4Q9NPG8 344 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 ARHGEF4Q9NR80 690 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 IARS2Q9NSE4 1012 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 CD274Q9NZQ7 290 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 CPSF2Q9P2I0 782 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 PPARGC1AQ9UBK2 798 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 ARL2BPQ9Y2Y0 163 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 MTO1Q9Y2Z2 717 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 USH1CQ9Y6N9 552 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 ZBTB42B2RXF5 422 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 LRIG2O94898 1065 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 C1RP00736 705 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 TPBGLP0DKB5 382 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 CHN1P15882 459 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 KRT4P19013 534 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 MSH3P20585 1137 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 PTPN3P26045 913 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 GJA8P48165 433 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 CCR3P51677 355 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 GNA12Q03113 381 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 CYP1B1Q16678 543 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms