RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	LARP4B	Q92615	738 aa	Known RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	SGCD	Q92629	289 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	TNFRSF25	Q93038	417 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	E2F7	Q96AV8	911 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	LRRC39	Q96DD0	335 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	VWCE	Q96DN2	955 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	MCRS1	Q96EZ8	462 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	EGLN2	Q96KS0	407 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	RIPOR3	Q96MK2	946 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	ZNF560	Q96MR9	790 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	ZNF578	Q96N58	590 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	PHF12	Q96QT6	1004 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	WRNIP1	Q96S55	665 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	TM9SF2	Q99805	663 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	TSEN34	Q9BSV6	310 aa	Known RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	ANO3	Q9BYT9	981 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	B3GNT4	Q9C0J1	378 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	ADNP	Q9H2P0	1102 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	GOLPH3	Q9H4A6	298 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	SMYD3	Q9H7B4	428 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	BRD9	Q9H8M2	597 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	TRIM39	Q9HCM9	518 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	TM9SF3	Q9HD45	589 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	ERVK-5	Q9HDB9	667 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	PCDH12	Q9NPG4	1184 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	RPRD1B	Q9NQG5	326 aa	Known RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	ARHGEF4	Q9NR80	690 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	CNNM1	Q9NRU3	951 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	FAM217B	Q9NTX9	383 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	DNAJC28	Q9NX36	388 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	CCDC59	Q9P031	241 aa	Known RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	EBF1	Q9UH73	591 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	IPO11	Q9UI26	975 aa	Known RBP	4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	RIMS3	Q9UJD0	308 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	MID2	Q9UJV3	735 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	ANAPC2	Q9UJX6	822 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	TMEM5	Q9Y2B1	443 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	ZNF175	Q9Y473	711 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	UGT2A1	Q9Y4X1	527 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	PCDHA3	Q9Y5H8	950 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	PCDHA11	Q9Y5I1	949 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	SLC4A4	Q9Y6R1	1079 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	BSN	Q9UPA5	3926 aa		4.08	□□□□□ -1.76
CHD2-225	ENST00000636861	TET1	Q8NFU7	2136 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	SCN5A	Q14524	2016 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	EMSY	Q7Z589	1322 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	PNMA8C	A0A1B0GUJ8	204 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	PRSS51	A0A1B0GVH4	220 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861		A0A1W2PPW3	197 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	BTBD11	A6QL63	1104 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	PDZK1P1	A8MUH7	402 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861		H3BMM5	538 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	hCG_1984214	I3L0E3	225 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	EML1	O00423	815 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	DNALI1	O14645	258 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	SLC9A3R1	O14745	358 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	PHGDH	O43175	533 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	HOXC11	O43248	304 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	NMT2	O60551	498 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	H2AFY	O75367	372 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	PEX14	O75381	377 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	FAM155B	O75949	473 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	OR7A10	O76100	309 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	NOL4	O94818	638 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	MFN2	O95140	757 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	DLGAP3	O95886	979 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	HLA-DRA	P01903	254 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	DHRS4L1	P0CG22	281 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	HOXD8	P13378	290 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	CREB1	P16220	341 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	JUNB	P17275	347 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	ME2	P23368	584 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	MYF6	P23409	242 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	ADRA1D	P25100	572 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	CNTF	P26441	200 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	CCND2	P30279	289 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	LRPAP1	P30533	357 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	IDUA	P35475	653 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	ADD2	P35612	726 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	PSMC2	P35998	433 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	CPOX	P36551	454 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	LTBR	P36941	435 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	DDOST	P39656	456 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	SLC26A3	P40879	764 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	CASP3	P42574	277 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	PTPN9	P43378	593 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	RECQL	P46063	649 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	OR3A3	P47888	321 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	NPTX2	P47972	431 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	CPA2	P48052	419 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	LEPR	P48357	1165 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	RFX5	P48382	616 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	AP1S2	P56377	157 aa		4.07	□□□□□ -1.76
CHD2-225	ENST00000636861	JAM2	P57087	298 aa		4.07	□□□□□ -1.76

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