RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 CAMK1DQ8IU85 385 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 CCDC117Q8IWD4 279 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 SHDQ96IW2 340 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 NCAPGQ9BPX3 1015 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 USP29Q9HBJ7 922 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 SPATA6Q9NWH7 488 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 MYLKQ15746 1914 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 CTAGE9A4FU28 777 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 H7C0C1 242 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 PDHA1P08559 390 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 CCNB1P14635 433 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 GABRG2P18507 467 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 CASQ1P31415 396 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 ATP5OP48047 213 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 PPIDQ08752 370 aaKnown RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 ENPP2Q13822 863 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 ARSIQ5FYB1 569 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 SEL1L2Q5TEA6 688 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 RYBPQ8N488 228 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 MRGPRX1Q96LB2 322 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 LRFN3Q9BTN0 628 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 DDX47Q9H0S4 455 aaKnown RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 CHRDQ9H2X0 955 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 ZDHHC6Q9H6R6 413 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 NOD2Q9HC29 1040 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 UBA2Q9UBT2 640 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 ITM2BQ9Y287 266 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 ZFHX2Q9C0A1 2572 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 ARHGAP42A6NI28 874 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 H0Y858 1186 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 KRIT1O00522 736 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 KCNN4O15554 427 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 LEFTY1O75610 366 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 ATP5BP06576 529 aaKnown RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 PTPN3P26045 913 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 CCNHP51946 323 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 PRKD1Q15139 912 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 ZNF567Q8N184 647 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 RASGEF1CQ8N431 466 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 AADATQ8N5Z0 425 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 HDAC11Q96DB2 347 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 RBM15Q96T37 977 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 RBM22Q9NW64 420 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDKL5-209ENST00000635828 LCMT1Q9UIC8 334 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 MMP17Q9ULZ9 603 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 SAR1BQ9Y6B6 198 aa8.66□□□□□ -1.02
CDKL5-209ENST00000635828 MID1O15344 667 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 LIASO43766 372 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 TJP3O95049 919 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 MMP2P08253 660 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 VPS41P49754 854 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 YBEYP58557 167 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-209ENST00000635828 ITKQ08881 620 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 C2orf54Q08AI8 447 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 HNRNPA1L2Q32P51 320 aaKnown RBP8.65□□□□□ -1.02
CDKL5-209ENST00000635828 FBXL6Q8N531 539 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 ACDQ96AP0 544 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 GABRG3Q99928 467 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 SLC25A13Q9UJS0 675 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 HPCAL4Q9UM19 191 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 WASF2Q9Y6W5 498 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 LRRK1Q38SD2 2015 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 ATP9BO43861 1147 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 IL1BP01584 269 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 RHOAP61586 193 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 SPARCL1Q14515 664 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 DARS2Q6PI48 645 aaKnown RBP8.65□□□□□ -1.02
CDKL5-209ENST00000635828 TMPRSS6Q8IU80 811 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 CCDC13Q8IYE1 715 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 SLC35B2Q8TB61 432 aa8.65□□□□□ -1.02
CDKL5-209ENST00000635828 TFB1MQ8WVM0 346 aaKnown RBP8.65□□□□□ -1.02
CDKL5-209ENST00000635828 PRR23AA6NEV1 266 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 MATN3O15232 486 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 USP12O75317 370 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 URI1O94763 535 aaPredicted RBP8.65□□□□□ -1.03
CDKL5-209ENST00000635828 METTL18O95568 372 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 PTPN7P35236 360 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 SERPINB6P35237 376 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 PSMD8P48556 350 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 COPS2P61201 443 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 IL10RBQ08334 325 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 TRADDQ15628 312 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 OASLQ15646 514 aaKnown RBP8.65□□□□□ -1.03
CDKL5-209ENST00000635828 APOL2Q9BQE5 337 aa8.65□□□□□ -1.03
CDKL5-209ENST00000635828 A0A1W2PP55 124 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 IFNB1P01574 187 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 UGT2B4P06133 528 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 PIRTP0C851 137 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 TGM2P21980 687 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 DRD3P35462 400 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 MMP13P45452 471 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 MTA1Q13330 715 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 SLC12A1Q13621 1099 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 EIF4HQ15056 248 aaKnown RBP8.64□□□□□ -1.03
CDKL5-209ENST00000635828 PCSK7Q16549 785 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 LPAL2Q16609 132 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 MARC1Q5VT66 337 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 C1orf210Q8IVY1 113 aa8.64□□□□□ -1.03
CDKL5-209ENST00000635828 KLHL7Q8IXQ5 586 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms